| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002533 |
|---|
| Symbol | |
|---|
| ID | 8556259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1021485 |
|---|
| End bp | 1022753 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646405622 |
|---|
| Product | putative hemolysin |
|---|
| Protein accession | YP_003285160 |
|---|
| Protein GI | 262393306 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGACA TCTCTACGGG TATCTTGTTT GCGCTACTCG CGTGTCTTAT CGTCATATCA
GGTTACTTTT CCGGCTCAGA AACAGGGATG ATGTCTCTGA ACCGTTATCG CTTAAAGCAC
TTAGCCAAAA ATGGGCATAA AGGCGCTAAG CGAGTCGAAA GGCTATTAGA CCGTCCAGAT
CGTTTGATTG GTCTTATTCT TATCGGCAAC AACCTCGTTA ATATTCTCGC GTCCGCCATC
GCGACCATTA TTGGTATGCG TTTGTATGGT GATTTAGGTG TCGCTATCGC AACCGGTGCA
CTGACTATGG TTGTATTGGT TTTTGCTGAA GTTACCCCAA AAACAATTGC AGCGCTGTAC
CCTGAACGCG TGTCTTACGC GAGCAGTATC CTACTGACCA TATTGATGAA GTTACTATCG
CCTTTGGTGA TGCTCGTTAA CTTTATTACG AATGGCTTTA TTCGTTTACT TGGCGTAAAA
GCGGATCACT CAGTAGAAGA CCATCTTAGT TCCGATGAGC TGCGTACCGT AGTAAACGAA
GCTGGCGGCT TGATCCCTCG CCGACACCAA GACATGTTGG TGTCTATTTT GGATCTTGAG
CACGTCACTG TGAACGACAT CATGGTGCCA CGTAATGAGA TTACCGGTAT CGATATTAAT
GATGACTGGA AATCCATCGT TCGTCAGCTT ACCCACTCAC CACATGGACG CATTGTTTTT
TATCGTGACC AAATTGATGA AGTGGTTGGC ATGCTGCGCC TGCGTGAAGC TTACCGCCTG
ATGCTGGAAA AAAACGAGTT CAATAAAGAG ACGCTATTAC GTGCTGCGGA TGAAGTCTAT
TACATCCCGG AAGGTACGCC ACTGAACGTG CAAATGTTAA AGTTCCAACG CAACAAACAG
CGTATTGGTC TGATTGTTGA TGAGTATGGC GACATTATTG GCTTGGTGAC ATTGGAAGAT
ATTCTGGAAG AGATCATTGG CGAATTCACG ACCTCGATTT CTCCAAGCCT TTCTGATGAA
ATCAGTCCTC AAGGTGACGG AAGCTTCCTC ATTGAAGGCA GCACCAATAT CCGAGATATC
AATAAAGGCC TGAAATGGGA TTTACCAACG GATGGCCCAA GAACGTTAAA CGGTCTTATT
TTAGAGCACC TGGAAGATAT TCCAGAGAGC CATTTAAGCG TGAGAGTGGC GGGTCATCCA
ATGGAGCTTG TTGAGATTGA AGAAAACCGC ATCAAGCTCG TTCGTGTTTA TCCTAAAAAG
AAAAAATAG
|
|---|
| Protein sequence | MDDISTGILF ALLACLIVIS GYFSGSETGM MSLNRYRLKH LAKNGHKGAK RVERLLDRPD
RLIGLILIGN NLVNILASAI ATIIGMRLYG DLGVAIATGA LTMVVLVFAE VTPKTIAALY
PERVSYASSI LLTILMKLLS PLVMLVNFIT NGFIRLLGVK ADHSVEDHLS SDELRTVVNE
AGGLIPRRHQ DMLVSILDLE HVTVNDIMVP RNEITGIDIN DDWKSIVRQL THSPHGRIVF
YRDQIDEVVG MLRLREAYRL MLEKNEFNKE TLLRAADEVY YIPEGTPLNV QMLKFQRNKQ
RIGLIVDEYG DIIGLVTLED ILEEIIGEFT TSISPSLSDE ISPQGDGSFL IEGSTNIRDI
NKGLKWDLPT DGPRTLNGLI LEHLEDIPES HLSVRVAGHP MELVEIEENR IKLVRVYPKK
KK
|
|---|
| |