Gene VEA_002523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002523 
Symbol 
ID8556239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1008478 
End bp1008675 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content44% 
IMG OID646405602 
Productcarbon storage regulator 
Protein accessionYP_003285150 
Protein GI262393296 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000181679 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATTT TGACTCGCCG CGTAGGCGAA ACACTGATGA TTGGTGATGA AGTGACTGTA 
ACTGTACTAG GTGTGAAAGG TAACCAAGTA CGTATCGGCG TTAACGCTCC GAAAGAGGTT
TCAGTTCACC GTGAAGAAAT CTACATGCGC ATTCAAGCTG AAAAAGGCAA TGGCAACGTT
GCTTCAGGTA ACTACTAA
 
Protein sequence
MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYMR IQAEKGNGNV 
ASGNY