| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002516 |
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| Symbol | |
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| ID | 8556232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 998224 |
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| End bp | 999210 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405595 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_003285143 |
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| Protein GI | 262393289 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCA GCAACACAGT AACCAAAGTT GAAGAGTTTG CATTTGACAA TGCGTCAGTG
AAGACCATTG ATAACGAACT CGAAAAATCA TCATCCACAG AAAGCAAAAC GGCTGCGCGT
GAAGAATTTG ACGCGAGCAG TAAAAGCTTA GACGCAACTC AGTTGTATCT AGGTGAAATT
GGCTTCTCAC CTCTACTTAC TGCCGAAGAA GAAGTGCTTT ATGCTCGACG AGCTCTGCGT
GGCGACGAAG CGGCACGTAA ACGTATGATC GAAAGTAACC TACGTTTGGT GGTCAAGATC
TCTCGTCGAT ACAGTAATCG CGGCCTAGCA CTACTCGATC TGATTGAAGA AGGTAACCTT
GGTTTGATCC GTGCGGTCGA GAAGTTCGAT CCAGAGCGTG GTTTCCGCTT CTCTACTTAT
GCGACCTGGT GGATCCGACA AACGATCGAA CGTGCGTTGA TGAACCAAAC TCGTACGATC
CGTCTACCTA TTCATGTCGT GAAAGAGCTA AACATTTATC TGCGTACTGC GCGTGAACTT
TCTCAGAAGC TCGATCACGA ACCTACCGCA GAAGAAATTG CTGCTCAGTT AGATATTCCA
GTCGAAGATG TAAGCAAAAT GCTACGTCTC AATGAGCGTA TCAGTTCTGT CGACACACCA
ATCGGTGGTG ACGGTGAAAA AGCGCTGTTG GATATTATTC CCGACGCAAA CAACTCCGAT
CCAGAAGTCT CGACTCAAGA TGACGATATC AAATCATCGC TGATTCATTG GTTAGAAGAG
TTGAACCCAA AACAGAAAGA AGTACTTGCA CGACGTTTTG GTCTTCTAGG CTATGAGCCT
TCGACGCTTG AAGAAGTTGG TCGAGAGATT GGTTTGACAC GTGAGCGCGT ACGTCAAATC
CAAGTAGAAG GTTTACGTCG TCTTCGTGAG GTTTTAATCA AGCAAGGTTT GAATATGGAA
AACTTATTTA ACGTCGAAGA TGATTAA
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| Protein sequence | MSISNTVTKV EEFAFDNASV KTIDNELEKS SSTESKTAAR EEFDASSKSL DATQLYLGEI
GFSPLLTAEE EVLYARRALR GDEAARKRMI ESNLRLVVKI SRRYSNRGLA LLDLIEEGNL
GLIRAVEKFD PERGFRFSTY ATWWIRQTIE RALMNQTRTI RLPIHVVKEL NIYLRTAREL
SQKLDHEPTA EEIAAQLDIP VEDVSKMLRL NERISSVDTP IGGDGEKALL DIIPDANNSD
PEVSTQDDDI KSSLIHWLEE LNPKQKEVLA RRFGLLGYEP STLEEVGREI GLTRERVRQI
QVEGLRRLRE VLIKQGLNME NLFNVEDD
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