| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002500 |
|---|
| Symbol | |
|---|
| ID | 8556216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 980683 |
|---|
| End bp | 981414 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646405579 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_003285127 |
|---|
| Protein GI | 262393273 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAA TTTATTTAGG CGTCAATATC GACCATATTG CCACTCTACG TAATGCACGT
GGTACAAAAT ACCCTGATCC TGTTCACGCT GCAGAAATTG CTGAGCGTGC AGGCGCGGAT
GGTATCACAA TTCACTTACG TGAAGACCGT CGCCATATTT TGGACCGTGA TGTACGTATT
CTGCGTGAAA CCATTCAAAC GCGTATGAAT CTAGAGATGG CAGTGACTGA CGAAATGGTT
GAGATTGCGC TGCAAACTCA ACCAGAGTTT GTGTGTTTAG TGCCTGAAAA GCGTGAAGAA
CTGACGACGG AAGGTGGCTT AGATGTAGTA GGGCAGCTTG AAAAAATTAA AGCTGCGACG
AAAAAGCTGA CAGATGCAGG CATTAAAGTT TCACTCTTTA TTGATGCTGA CCGTCAACAG
ATTGAAGCTG CGAAAAAGTG TGGTGCTCCG TTTATTGAGC TACACACGGG TCATTATGCT
GATGCGACGA CAGAAGACGA ACAACAAGCT GAACTGAAGA AGATTGCCGC TGGTGCGAGT
TATGCTCATG ACCTAGGTAT TATTGTTAAT GCCGGGCATG GCCTGACTTA TCACAATGTC
GCGCCAATTG CTGCATTACC AGAAATTTAC GAACTCAACA TTGGTCACTC AATCATTGGT
CGCGCGGTAT TTGATGGTTT GAATAAAGCG GTTGCGGACA TGAAAGCACT GATGATTGAG
GCACGCCAGT AA
|
|---|
| Protein sequence | MSSIYLGVNI DHIATLRNAR GTKYPDPVHA AEIAERAGAD GITIHLREDR RHILDRDVRI
LRETIQTRMN LEMAVTDEMV EIALQTQPEF VCLVPEKREE LTTEGGLDVV GQLEKIKAAT
KKLTDAGIKV SLFIDADRQQ IEAAKKCGAP FIELHTGHYA DATTEDEQQA ELKKIAAGAS
YAHDLGIIVN AGHGLTYHNV APIAALPEIY ELNIGHSIIG RAVFDGLNKA VADMKALMIE
ARQ
|
|---|
| |