| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002493 |
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| Symbol | |
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| ID | 8556209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 973799 |
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| End bp | 974764 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405572 |
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| Product | sigma factor RpoE negative regulatory protein RseB precursor |
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| Protein accession | YP_003285120 |
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| Protein GI | 262393266 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000011568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTCTGATCAG CGCTTGCGCT CTGTTCAGTA TGATGTCTTC TCAAGCCTTT
GCTGGTGATA AGCCAGCGGA GGCTTTATTG CATCAAATGA GCGAGGCGAG TAAGAATTTA
AGTTACGAAC TCTCTTATAT CCTTATCAAA AAGAACAGCA TTGAGCCGTT GCTGTATCGT
CATGCCACGC ATGGTGACGA TCAATATGCT CATCTTGTTT ATTTAAGTGG CCCTGTGCGC
GAAGTGATTC GTCGCGGCAC AGAAGTAAGC TATATCGAAA CGGGTTTAGA ACCATTCACC
ATCGAGTCAG GTAAAATGGT CGCTCCGACC ATGCCTATGC TCAACACCAA TATCGATGAG
CTAAACTTGT ATTACGACTA TGTAAAAGTG GGTAGAGCTC GTGAAGCAGG TGTAGCAACA
CAAGTGCTGC GTGTCGTCCC TAAAGACGGT CTGCGCTATT CATACGTACT ATGGATCGAT
GAAAAGAGTA AATTGCCGTT ACGTGCCGAC CTTGTGGACC GTGATGGTGA GATGCTTGAA
CAATATCGCA CTATTTCTTA CACGGTGAAT CCAAAAATCG CAGAGTTAAT GAGTGGCCTA
CAAGATGTTC AATTACCAGC TGTTCTCACC ATGCCAAAAG GCGATATTGG AACCAGCAAT
TGGCAGGTAG GTTGGATCCC TGAAGGTTTC GAACCGAACG AGCTCAACCG TTATCGTATG
GCTGTTACTA ATCAAATGGT GGAGAGTCAG CTGTACTCTG ACGGTCTGTT TAGCTTCTCT
GTTTACGTAG CAAACAAAGA TGAGCATTCG TTAAAAGGGC AGTTGGTTCG CCAAGGCAGA
AGAACGCTAC ACAGTTTTGT GAGCGGTCAA CATGAAATCT CCGTTGTAGG AGACATTCCG
CCGACCACAG CACAACGTAT CGCCCAATCT GTCACATTTA ATGTAACAAA GAGTAAACAA
CAATGA
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| Protein sequence | MKKFLISACA LFSMMSSQAF AGDKPAEALL HQMSEASKNL SYELSYILIK KNSIEPLLYR
HATHGDDQYA HLVYLSGPVR EVIRRGTEVS YIETGLEPFT IESGKMVAPT MPMLNTNIDE
LNLYYDYVKV GRAREAGVAT QVLRVVPKDG LRYSYVLWID EKSKLPLRAD LVDRDGEMLE
QYRTISYTVN PKIAELMSGL QDVQLPAVLT MPKGDIGTSN WQVGWIPEGF EPNELNRYRM
AVTNQMVESQ LYSDGLFSFS VYVANKDEHS LKGQLVRQGR RTLHSFVSGQ HEISVVGDIP
PTTAQRIAQS VTFNVTKSKQ Q
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