| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002491 |
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| Symbol | |
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| ID | 8556207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 972571 |
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| End bp | 973149 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405570 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_003285118 |
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| Protein GI | 262393264 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.012541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGAGC AGCTGACCGA TCAAGTATTG ATTGAGCGAG TTCAGAATGG CGATAAGCAA
GCATTCAACC TGCTGGTAAC GAAGTACCAG AACAAGGTAT GTAATCTTAT TTCCAGATAC
GTTAGTAATC CTGGCGATGT ACCAGATGTA GCACAAGAAG CGTTTATTAA AGCTTACCGA
GCTATTCCCA GCTTTCGTGG GGAGAGTGCG TTTTATACGT GGCTGTATCG CATTGCAGTG
AATACTGCGA AAAATCACAT TGTTGCTCAA GGGCGTAGAC CTCCAGCGAC AGATGTCGAT
GCTGAAGATG CTGAATTTTA CGAAACAGGT AGTGCACTTA AAGAAATATC GAACCCTGAG
AACTTAACGT TGTCCAAAGA ATTGCAACGG GTGGTGTTCA GTGCAATCGA AGCTTTACCT
GAAGATTTAA AAACCGCAAT GACATTACGA GAGCTCGATG GCTTGAGTTA TGAAGAAATT
GCAGAAGTGA TGGATTGCCC GGTAGGAACG GTACGATCGC GTATCTTCCG TGCTCGTGAG
GCGGTGGAAA AGAAAATCAG ACCTCTTTTG CAACGCTAG
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| Protein sequence | MNEQLTDQVL IERVQNGDKQ AFNLLVTKYQ NKVCNLISRY VSNPGDVPDV AQEAFIKAYR
AIPSFRGESA FYTWLYRIAV NTAKNHIVAQ GRRPPATDVD AEDAEFYETG SALKEISNPE
NLTLSKELQR VVFSAIEALP EDLKTAMTLR ELDGLSYEEI AEVMDCPVGT VRSRIFRARE
AVEKKIRPLL QR
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