Gene VEA_002480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002480 
Symbol 
ID8556196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp962069 
End bp962725 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID646405559 
Productribose 5-phosphate isomerase A 
Protein accessionYP_003285107 
Protein GI262393253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00368346 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAAAGCGGCT GGTTGGGCAG CACTAAAATA TGTTGAGAAA 
GGCAGCATTG TCGGTGTTGG TACTGGCTCT ACCGTGAATC ACTTCATCGA TGCACTAGGC 
ACTATCAAAG ACGATATTAA AGGTGCAGTG TCTAGCTCTG TCGCTTCAAC TGAGCGCCTT 
AAAGAGCTTG GTATTGAAGT ATACGAGTGT AACGACGTAA TGAAGCTGGA TGTGTATGTT 
GATGGCGCAG ACGAAATTAA CCCAGCACGT GAAATGATCA AAGGCGGCGG CGCGGCTCTG 
ACTCGTGAGA AAATTGTCGC AGCAATCTCT GATAAGTTTG TATGTATTGT TGACGGCACC 
AAAGCAGTTG ACGTACTAGG TCAGTTCCCA CTACCTGTAG AAGTGATCCC AATGGCACGC 
TCTTACGTTG CGCGCGAATT AGTAAAACTG GGCGGTGACC CGGCTTACCG TGAAGGCGTT 
GTGACTGACA ACGGCAACGT AATTTTGGAT GTACACAACA TGCAGATTAC TAACCCGAAA 
GAAATGGAAG ACAAGATCAA CGGTATCGCG GGTGTGGTGA CTGTGGGTCT TTTTGCTCAC 
CGTGGTGCTG ACGTCGTAAT CACAGGTACA CCAGAAGGCG CAAAAATTGA AGAATAA
 
Protein sequence
MTQDEMKKAA GWAALKYVEK GSIVGVGTGS TVNHFIDALG TIKDDIKGAV SSSVASTERL 
KELGIEVYEC NDVMKLDVYV DGADEINPAR EMIKGGGAAL TREKIVAAIS DKFVCIVDGT 
KAVDVLGQFP LPVEVIPMAR SYVARELVKL GGDPAYREGV VTDNGNVILD VHNMQITNPK 
EMEDKINGIA GVVTVGLFAH RGADVVITGT PEGAKIEE