Gene VEA_002478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002478 
Symbol 
ID8556194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp959790 
End bp960482 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID646405557 
Producthypothetical protein 
Protein accessionYP_003285105 
Protein GI262393251 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.655633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGT ATTCATTTTT GCTGGCTTCT GCACTCAGCC TTACTAGTGC TTCAGTGTTG 
GCGAACTCGC CTGAATTTGC TCACGTAACG ACGACAGGTT ATGGTGAAGT TATTGCTACA 
CCAGATATGG CGACGTTTTC TGTGAAAGTG GTAGACACGA CAATGACTGC TGAACAGGCC 
AAGCAGTCAG TTGACAAAAC CGTTGAGCAA TTTCTGAAAA ATCTGTCCGA TGCTGGCTTA 
TCAAAAGACA ATGTTACCAG CTCGAATTTA TACCTTGCGC CTCAATACCA CTACCCTAAA 
TCTGGTAAAG CAGAGCTCGT TGGTTATCGC GCTTCTCGTA GCATTGATGT GACGGTTACG 
GATCTAAAAA ACCTAAACCA GTACCTAGAT ATGGCGTTAG AAGCAGGGAT TAATCAGGTT 
GATAATATTC AACTTAAGGT AAGCAACCAG GCTGAGTATC AGCAAAAGGC ACGCATGGTG 
GCTATCCAAG ATGCGCGAGA AAAAGCAGCG TCACTGGCTA CTGGCTTTGA GAAAAAATTG 
GGTGATGTCT GGCAGATCAA TTACAGACAG ATGCACGTTC AGCCTGTTCT AATGCGCTCG 
ATGGCGATGG ACAGTAAAGA AGGGGCAAAC AGCTACCAGG ATTCTACCAT GATTATTCGC 
GATCAAGTTG ACGTGATTTA CAAGCTGAAG TAA
 
Protein sequence
MRLYSFLLAS ALSLTSASVL ANSPEFAHVT TTGYGEVIAT PDMATFSVKV VDTTMTAEQA 
KQSVDKTVEQ FLKNLSDAGL SKDNVTSSNL YLAPQYHYPK SGKAELVGYR ASRSIDVTVT 
DLKNLNQYLD MALEAGINQV DNIQLKVSNQ AEYQQKARMV AIQDAREKAA SLATGFEKKL 
GDVWQINYRQ MHVQPVLMRS MAMDSKEGAN SYQDSTMIIR DQVDVIYKLK