Gene VEA_002476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002476 
Symbol 
ID8556192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp957890 
End bp958519 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID646405555 
Productlysine efflux permease 
Protein accessionYP_003285103 
Protein GI262393249 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTTGT GGGTTCTATT GCAAGGGTTT GGTTTAGGGG CATCAATGAT CATTCCGATC 
GGCGCACAAA ATGCGTATGT CTTAAATCAA GGCATAAAGC GCAATCATCA CCTGACGACT 
GCCACTATTT GTAGCATCCT AGATATGATC TTCATTTCTC TAGGTATCTT TGGTGGTGGT 
GCGATTTTGT CTCAAAATGA AATCTTACTA ACATCGGTGA CGCTTGGTGG TATTGCCTTC 
CTGAGCTTTT ATGGATTACT GTCACTTAAG AGTGCGTTTA AGTCAGACAG TGAGTCAGAA 
TCAAAAGGTG AAGTCGTCGC TCGTGGTCGT CGAACGGTCA TATTAGGTGC GTTAGCCGTC 
ACAGTACTTA ACCCACACTT GTACTTAGAT ACAGTCGTCA TTCTGGGCTC TATTGGTGGG 
CAGTTTGAAG GCCATGACCG AATTGCTTTT GCACTAGGTA CGATGATGGC TTCCTTTGTT 
TGGTTCTATA CCTTGTCGAT AGGAGCCGCA AAACTAGGCC CTACCCTATC AAAGCCAAGA 
GTGAAAAAAG GCATCGACAT CGCGGTCGCA GTAATGATGT TCACGATAGC GTATATTTTA 
GCTAGCGAAC TTATTGAAAA GTACTGGTAA
 
Protein sequence
MSLWVLLQGF GLGASMIIPI GAQNAYVLNQ GIKRNHHLTT ATICSILDMI FISLGIFGGG 
AILSQNEILL TSVTLGGIAF LSFYGLLSLK SAFKSDSESE SKGEVVARGR RTVILGALAV 
TVLNPHLYLD TVVILGSIGG QFEGHDRIAF ALGTMMASFV WFYTLSIGAA KLGPTLSKPR 
VKKGIDIAVA VMMFTIAYIL ASELIEKYW