Gene VEA_002471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002471 
Symbol 
ID8556187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp952458 
End bp953495 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content45% 
IMG OID646405550 
ProductD-erythrose-4-phosphate dehydrogenase 
Protein accessionYP_003285098 
Protein GI262393244 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.683053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGG TTGCGATCAA TGGATTTGGA CGTATAGGTC GTAATGTTCT GCGAGCCGTA 
TATGAAAGCG GAAAACATCA GCAGATCAAG GTTGTGGCGG TTAACGAATT AGCGCAGCCA 
GAAGCGATGG CGCACCTACT GCAATATGAC ACTAGTCATG GTCGCTTCGG TAAAAAAATC 
TCCCACGACC AAGAACACTT GCATGTTCAT CATGACAGCG GCGAATATGA CTCTATTCGC 
ATTCTTCACC TCTCTGAACT CGAACTACTT CCTTGGCGCG ATTTAGAAGT CGATATTGTC 
TTGGATTGCA CTGGCGTGTT TGGTTCGCAA GCCGATGGGC AAGCGCATAT AGAAGCTGGC 
GCGAAGAAAG TGCTGTTTTC ACACCCGGGC GCAAACGACA TAGATAATAC GATTATCTAT 
GGTGTGAACC ACGAAACTCT GAAAGACGAG CACCGTGTTG TCTCCAATGG CTCTTGTACT 
ACCAACTGTA TCGTTCCCAT CATTAAAGTG TTAGACGAAG CCTTCGGTAT TGAGTCCGGT 
ACCATTACCA CGATTCACTC TTCCATGAAC GATCAGCAAG TAATCGATGC GTACCATAAC 
GATCTACGCC GTACCCGCGC TGCTAGCCAA TCTATTATTC CGGTTGACAC CAAGTTGCAT 
AAGGGGATTG AAAGAATCTT CCCGAAATTT TCCAACAAAT TCGAAGCAAT TTCTGTTCGT 
GTCCCAACCG TTAACGTCAC CGCAATGGAT TTAAGTGTCA CAATTAATAC AAATGTGAAA 
GTTAATGACG TAAATCAAAC CATTGTTAAC GCATCTCAGT GTACATTACG TAACATTGTT 
GACTATACTG AATCGCCACT CGTTTCCATC GACTTTAACC ACGACCCCCA TAGTGCGATT 
GTAGATGGAA GCCAGACTAG AGTGAGTAAC GGGCAACTCG TAAAAATGCT CGTTTGGTGC 
GACAACGAAT GGGGCTTTGC TAACCGGATG CTGGATACTG CCTTAGCAAT GCAAGCTTCT 
TCTCAAGTGG AGCAGTAA
 
Protein sequence
MLKVAINGFG RIGRNVLRAV YESGKHQQIK VVAVNELAQP EAMAHLLQYD TSHGRFGKKI 
SHDQEHLHVH HDSGEYDSIR ILHLSELELL PWRDLEVDIV LDCTGVFGSQ ADGQAHIEAG 
AKKVLFSHPG ANDIDNTIIY GVNHETLKDE HRVVSNGSCT TNCIVPIIKV LDEAFGIESG 
TITTIHSSMN DQQVIDAYHN DLRRTRAASQ SIIPVDTKLH KGIERIFPKF SNKFEAISVR 
VPTVNVTAMD LSVTINTNVK VNDVNQTIVN ASQCTLRNIV DYTESPLVSI DFNHDPHSAI 
VDGSQTRVSN GQLVKMLVWC DNEWGFANRM LDTALAMQAS SQVEQ