Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002463 |
Symbol | |
ID | 8556179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 942317 |
End bp | 943048 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405542 |
Product | ribosomal RNA small subunit methyltransferase E |
Protein accession | YP_003285090 |
Protein GI | 262393236 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCC CTCGAATTTA TCATCCAGAA ACCATTCATC AACTTGGCTC ACTTGCTTTA AGTGACGACG CAGCAGGCCA TATCGGCCGT GTTCTGCGCA TGAAAGAAGG CCAAGACGTT CTCCTATTTG ACGGCAGCGG CGCAGAATTC CCAGCGGTTA TCAGTGAAGT CAGCAAAAAG ACGGTTTTGG TTAACATTAC CGAGCGTGTA GAAAACAGTA TTGAATCCCC TTTAGACCTG CACCTTGGTC AAGTTATTTC ACGTGGCGAT AAGATGGAGT TCACTATCCA AAAGTCAGTG GAACTTGGCG TCAATACCAT CACACCTTTG ATTTCCGAAC GTTGTGGCGT CAAGCTTGAC CAAAAGCGCT TTGAGAAAAA ACTCGCGCAA TGGCAAAAAA TCGCCATCAG TGCCTGTGAG CAGTGTGGAC GCAATGTCGT TCCAGAAATT CGTCCAATTA TGAGCTTGGA AGAGTGGTGT AAAGAAGAGT ACGATGGCTT AAAGCTCAAT CTTCATCCTC GTGCTAACTA CTCAATCAAC ACACTGCCAA CACCTGTTGA GAAAGTGCGC CTACTGATCG GCCCTGAAGG CGGTTTATCG TCTGAAGAGA TCGAGATGAC TCGAGAATAT CAATTTGAAG AAACGCTACT CGGCCCTCGC GTTCTGCGCA CCGAAACAGC GGCTCTGACA GCAATTACAG CCTTACAAGT TCGTTTCGGC GATCTTGGTT AA
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Protein sequence | MRIPRIYHPE TIHQLGSLAL SDDAAGHIGR VLRMKEGQDV LLFDGSGAEF PAVISEVSKK TVLVNITERV ENSIESPLDL HLGQVISRGD KMEFTIQKSV ELGVNTITPL ISERCGVKLD QKRFEKKLAQ WQKIAISACE QCGRNVVPEI RPIMSLEEWC KEEYDGLKLN LHPRANYSIN TLPTPVEKVR LLIGPEGGLS SEEIEMTREY QFEETLLGPR VLRTETAALT AITALQVRFG DLG
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