Gene VEA_002463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002463 
Symbol 
ID8556179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp942317 
End bp943048 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content47% 
IMG OID646405542 
Productribosomal RNA small subunit methyltransferase E 
Protein accessionYP_003285090 
Protein GI262393236 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCC CTCGAATTTA TCATCCAGAA ACCATTCATC AACTTGGCTC ACTTGCTTTA 
AGTGACGACG CAGCAGGCCA TATCGGCCGT GTTCTGCGCA TGAAAGAAGG CCAAGACGTT
CTCCTATTTG ACGGCAGCGG CGCAGAATTC CCAGCGGTTA TCAGTGAAGT CAGCAAAAAG
ACGGTTTTGG TTAACATTAC CGAGCGTGTA GAAAACAGTA TTGAATCCCC TTTAGACCTG
CACCTTGGTC AAGTTATTTC ACGTGGCGAT AAGATGGAGT TCACTATCCA AAAGTCAGTG
GAACTTGGCG TCAATACCAT CACACCTTTG ATTTCCGAAC GTTGTGGCGT CAAGCTTGAC
CAAAAGCGCT TTGAGAAAAA ACTCGCGCAA TGGCAAAAAA TCGCCATCAG TGCCTGTGAG
CAGTGTGGAC GCAATGTCGT TCCAGAAATT CGTCCAATTA TGAGCTTGGA AGAGTGGTGT
AAAGAAGAGT ACGATGGCTT AAAGCTCAAT CTTCATCCTC GTGCTAACTA CTCAATCAAC
ACACTGCCAA CACCTGTTGA GAAAGTGCGC CTACTGATCG GCCCTGAAGG CGGTTTATCG
TCTGAAGAGA TCGAGATGAC TCGAGAATAT CAATTTGAAG AAACGCTACT CGGCCCTCGC
GTTCTGCGCA CCGAAACAGC GGCTCTGACA GCAATTACAG CCTTACAAGT TCGTTTCGGC
GATCTTGGTT AA
 
Protein sequence
MRIPRIYHPE TIHQLGSLAL SDDAAGHIGR VLRMKEGQDV LLFDGSGAEF PAVISEVSKK 
TVLVNITERV ENSIESPLDL HLGQVISRGD KMEFTIQKSV ELGVNTITPL ISERCGVKLD
QKRFEKKLAQ WQKIAISACE QCGRNVVPEI RPIMSLEEWC KEEYDGLKLN LHPRANYSIN
TLPTPVEKVR LLIGPEGGLS SEEIEMTREY QFEETLLGPR VLRTETAALT AITALQVRFG
DLG