| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002459 |
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| Symbol | |
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| ID | 8556175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 939033 |
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| End bp | 940139 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405538 |
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| Product | type IV pilus (Tfp) assembly protein ATPase component PilU |
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| Protein accession | YP_003285086 |
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| Protein GI | 262393232 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTAA ATAAATTTCT CGAAGGTATG CTGGCGCTGA AAGCGTCGGA TCTGTACATC
ACGGTTGGTG CGCCAATTTT GTTTCGCGTG GATGGCGAAT TGCGACCTCA AGGTGAAAAA
CTCACCGAGA GTGATGTGGC GGCATTACTC GACAGTGCTA TGGAGCCAGA TCGGCGTCAG
GAATTTCGTA AAAGTCGTGA ATCGAATTTT GCCATTGTGA GAGATTGTGG CCGCTTCCGT
GTTAGTGCTT TTTTTCAACG GGAATTACCA GGCGCAGTGA TTCGTCGTAT TGAAACCAAT
ATTCCCACTT TTGAGCAGTT AAAGTTACCG TTAGTGTTGC AAGATTTGGC AATAGCTAAG
CGTGGTTTGG TGCTGGTGGT CGGTGCTACT GGGTCAGGTA AATCCACCAC AATGGCGGCA
ATGACGGGCT ATCGAAACAG CAACAAGACG GGACACATTT TGACGGTCGA AGATCCGATC
GAATTCGTGC ATGAGCACAA GCGCTGTATC GTGACTCAAC GCGAAGTTGG GTTAGATACG
GAAAGCTATG AAGTTGCGCT TAAAAACTCG CTGCGTCAAG CGCCAGATAT GATTTTGATT
GGCGAGATCC GTAGCCGTGA AACAATGGAA TACGCGATGA CCTTCGCCGA AACGGGCCAT
TTGTGTATGG CAACGTTGCA CGCCAACAAT GCCAACCAAG CTTTAGAGCG CATTCTTCAC
TTGGTACCGA AAGATCAAAA AGAACAATTC TTGTTCGACT TGTCGATGAA CCTAAAAGGC
GTGGTTGGTC AGCAGCTGAT CCGAGATAAA AATGGGCAGG GGCGTCATGG TGTGTTTGAG
ATCTTGCTAA ATAGCCCACG TGTGTCGGAT TTGATCCGTC GCGGAGATTT GCATGAGTTG
AAGTCAACCA TGGCTCGCTC AAATGAGTTT GGTATGCTGA CGTTCGATCA ATCTCTTTAT
AAGTTGGTGA TGCAAGGTAA GATCAGCGAA GAGGACGCGC TGCACAGTGC CGATTCGGCG
AATGATTTGC GCTTGATGTT GAAAACACAG CGTGGCGAAG CATTCTCTAC GGGCAGTCTT
GCTAACGTTA AGATCGATAT GGATTAA
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| Protein sequence | MDLNKFLEGM LALKASDLYI TVGAPILFRV DGELRPQGEK LTESDVAALL DSAMEPDRRQ
EFRKSRESNF AIVRDCGRFR VSAFFQRELP GAVIRRIETN IPTFEQLKLP LVLQDLAIAK
RGLVLVVGAT GSGKSTTMAA MTGYRNSNKT GHILTVEDPI EFVHEHKRCI VTQREVGLDT
ESYEVALKNS LRQAPDMILI GEIRSRETME YAMTFAETGH LCMATLHANN ANQALERILH
LVPKDQKEQF LFDLSMNLKG VVGQQLIRDK NGQGRHGVFE ILLNSPRVSD LIRRGDLHEL
KSTMARSNEF GMLTFDQSLY KLVMQGKISE EDALHSADSA NDLRLMLKTQ RGEAFSTGSL
ANVKIDMD
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