Gene VEA_002454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002454 
Symbol 
ID8556170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp935656 
End bp936213 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID646405533 
Productmembrane protein 
Protein accessionYP_003285081 
Protein GI262393227 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA TGAGTTTTCT CATCTCAACC CTATTTGACC TGTACATCAT GGTCGTAATT 
TTGCGAATTT GGTTGCAAGC TGCACGCGCA GACTTCTACA ACCCATTCTC GCAATTCATA 
GTAAAAGCGA CTCAGCCGGT CATTGGTCCA CTGCGCCGCA TTATCCCTTC CGTGGGGAAT 
ATTGACCTAG CAACAGTGTT GTTTGCCTAC GTGTTGTGTG TGCTTAAATT TGTCGTTCTG 
ATCCTGATAG CTTCGAACGG TTCCGTCTCT TTCAGCGCTG ATTTCTTGTT CTTGGGCTTG 
TTATCATTAA TCAAAGCCGC TGGAGGTCTG CTGTTCTGGG TACTATTGAT CCGTGCAATT 
TTGAGCTGGG TAAGCCAAGG TCGCAGCCCT ATCGAGTACG TATTCCATCA ATTAACCGAG 
CCAATGTGCG CACCAATCCG TCGTATTATT CCGGCTATTG GTGGTCTTGA TTTGAGCGTA 
CTGGTACTGT TTATCGGCTT GCAGTTCGCG AACTTCTTGA TGGGTGATAT CATTGGTCCA 
ATTTGGTTCC AGTTATAA
 
Protein sequence
MNSMSFLIST LFDLYIMVVI LRIWLQAARA DFYNPFSQFI VKATQPVIGP LRRIIPSVGN 
IDLATVLFAY VLCVLKFVVL ILIASNGSVS FSADFLFLGL LSLIKAAGGL LFWVLLIRAI 
LSWVSQGRSP IEYVFHQLTE PMCAPIRRII PAIGGLDLSV LVLFIGLQFA NFLMGDIIGP 
IWFQL