| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002448 |
|---|
| Symbol | |
|---|
| ID | 8556164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 930750 |
|---|
| End bp | 931778 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646405527 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003285075 |
|---|
| Protein GI | 262393221 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCATT ACGCGATATT AGCGAATCCG GGTCATAACC GAATTTACTT TGATAGCGCA
ATGACCATTG CCTGTTCAGA GCTAAAAGCA ATTTTAGCTT CACAAGGCGT GGATGTGACA
GAAATTGGTA GTAAAGAGGT TGGCTTACCT GCTGCGTTGG TGTTTTCTTG TCAGGAAGCT
CTAAGCGATG AGCAGACGCG AAGAATCGCA GCCTCTTCGA TTTACTATGC ACTATTTGAA
GTGTGCGAAG ATGGTTTACT TCGACCAATT CAAGCGCCAG CGTTCAATAC TTTCCCGGAA
AGCATGAGTC AGATTCTGCG TTATACCGGT AAAACAAACG AGCAGTTTAC TCGCTTGATG
GTGAATATCG GCATTAGTGC ATCCAATACG GGAAGTGAGC AGCTGACCTT AATGGATCCA
ATGTGTGGTA AAGGTACAAC CTTATTTGAA GGCTTGATCC ACGGTTTGAA CGTGGTAGGG
GTAGAGATCA ATGCCAAGTG GGTGCAAGAG ATCCAGACCT TTATCGTTAA GTTCATGAAG
AATGGCCGCT TTAAGCACAA AGTGAGCAAA GAAAAGCGCA CTGCGGGTGG CAAGAAAGTG
GCGGATGGTT TCGTGGTTGA AGCTGCAGCA AATAAAGAAG ATTACAACCA AGGCAACCTT
CAGTTTATGA AGCTGTATTC GGCTGATACA CGTATCGCTG ATCAAGTCGT GAAAAAGAAC
TCAGTTGATG TGATGGTGTC TGACTTGCCT TACGGCGTGC AGCACGGCAG CAAAAATGCC
AAGGACAGCA AACTGAACCG GAGCCCACTA GAGCTTTTAA ACGAGGCTCT GCCTGCATGG
AAAGTGGTAT TGAAAAAACA AGGTTCAGTG GTGTTGTCTT TTAATGAATT TACGTTGAAA
TGGAAAGACG TCGCGGCATT ATTTGAAGAG CAAGGTTGGA AGGTACTTTC AGAAGAGCCT
TACATCGGTT ATCTTCACCG TGTTGATCAA TCTATCAACC GCAATATTAT TGTGGCAGTA
AAACCATAA
|
|---|
| Protein sequence | MYHYAILANP GHNRIYFDSA MTIACSELKA ILASQGVDVT EIGSKEVGLP AALVFSCQEA
LSDEQTRRIA ASSIYYALFE VCEDGLLRPI QAPAFNTFPE SMSQILRYTG KTNEQFTRLM
VNIGISASNT GSEQLTLMDP MCGKGTTLFE GLIHGLNVVG VEINAKWVQE IQTFIVKFMK
NGRFKHKVSK EKRTAGGKKV ADGFVVEAAA NKEDYNQGNL QFMKLYSADT RIADQVVKKN
SVDVMVSDLP YGVQHGSKNA KDSKLNRSPL ELLNEALPAW KVVLKKQGSV VLSFNEFTLK
WKDVAALFEE QGWKVLSEEP YIGYLHRVDQ SINRNIIVAV KP
|
|---|
| |