| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002444 |
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| Symbol | |
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| ID | 8556160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 927244 |
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| End bp | 928362 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405523 |
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| Product | membrane-bound lytic murein transglycosylase C precursor |
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| Protein accession | YP_003285071 |
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| Protein GI | 262393217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000187183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTGTCTTTAT TGCTGCCGCA CTTTTAATGG CTGGCTGTAG CCGTGAATTC
GTCGAAAAGA TTTATGACGT CAACTACGAG CCCACAAACC GTTTTGCCAA TAACTTAGCT
GAGCTACCTG GACAATTTGA AAAAGATACC GCCGCGTTGG ATGCCCTGAT CAATAGTTTC
TCTGGTAATA TTCAAAAGCG CTGGGGTAAA AAAGAAATTA AGTACGCAGG CAAAAGTAAT
TACGTCAAAT ATATCGATAA CTACCTTAGC CGTGCCGAAG TCGACTTTCG CAAAGGCGTG
ATCACGATTG AAACCGTATC ACCGACCGAG CCCCAAAAGC ACCTCAAAGA GGCGATTGTC
ACTACCTTAC TCACGCCAGA CGACCCAGCT CACGTCGACT TGTTCTCCTC AAAAGGAATC
ACGTTAGAAG GGCAACCATT TCTGTATAAA CAAGTTGTCG ATCAAGACAA TAAGCCAATT
CAGTGGTCTT GGCGGGCAAA CCGATTTGCG GAGTATCTCA TCGCAAACAA AATCAAAACC
AAAGACGTTG ATTTCAAGAA AGCGTATTAC GTCGAAATCC CCATGGTTGA AGACCATTTT
TCAACACGCA GCTACCAATA CGCCGACATC GTGCGCCGAG CTTCCAAGAA ATACGATATT
CCAGAAGATT TGATATACGC CATAATTAAA ACCGAGAGCA GCTTCAACCC GTACGCGGTA
AGTTGGGCAA ATGCGTATGG CTTAATGCAA GTTGTACCTA AAACCGCCGG TCGAGACGTA
TTCAAGCTCG TGAAAAAGCG CTCAGGCCAA CCAAGCCCGG AATATTTGTT TAATCCAGAA
AACAACATCG ATACCGGTAC TGCGTATTTC TACATCTTAA AAAATCGTTA TTTAAGAGAA
GTCCATCACC CAACCTCTCT CGAGTACAGT ATGATTTCAG CTTACAATGG TGGTACTGGA
GGTGTTTTAA ACACATTCCA TCGCAGCGAT CGCAAACGCG CAATGCAAGA TCTTAATTCG
TTGCAACCCA ACCAAGTTTA TTGGGCACTA ACTAAGAAAC ATCCGAACGC AGAAGCACGT
CGTTACCTAG AAAAAGTTAC AAATTCAAAA AGGAATTAA
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| Protein sequence | MKKIVFIAAA LLMAGCSREF VEKIYDVNYE PTNRFANNLA ELPGQFEKDT AALDALINSF
SGNIQKRWGK KEIKYAGKSN YVKYIDNYLS RAEVDFRKGV ITIETVSPTE PQKHLKEAIV
TTLLTPDDPA HVDLFSSKGI TLEGQPFLYK QVVDQDNKPI QWSWRANRFA EYLIANKIKT
KDVDFKKAYY VEIPMVEDHF STRSYQYADI VRRASKKYDI PEDLIYAIIK TESSFNPYAV
SWANAYGLMQ VVPKTAGRDV FKLVKKRSGQ PSPEYLFNPE NNIDTGTAYF YILKNRYLRE
VHHPTSLEYS MISAYNGGTG GVLNTFHRSD RKRAMQDLNS LQPNQVYWAL TKKHPNAEAR
RYLEKVTNSK RN
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