Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002409 |
Symbol | |
ID | 8556104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 882547 |
End bp | 883350 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405467 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_003285036 |
Protein GI | 262393182 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAACA ACGATTTAGT CACCGTGAAC AACCTCACTT TTTCACGGGG AGAGCGCAAG ATCTTTGATG GTATTGATCT GCATGTTCCT GAGGGCAAAG TGACGGCCAT TATGGGACCA TCGGGAATTG GTAAAACAAC ACTGCTGCGT TTAATTGGTG GTCAGTTGTA TCCCGAGCAA GGAGAGATCT GGTTTGATGG CGACAATATT CCCTCTCTCT CGCGTAAAAA ACTCTACCAT GCTCGAAAGA AAATGAGCAT GTTGTTTCAA TCAGGAGCTT TATTCACTGA TTTGAATGTC TTTGATAACG TCGCCTTCCC ATTGCGAGAG CATACGAATT TATCTGAAGA GCTGATTCGT ACCATGGTAT TGCTTAAGCT TGAAGCCGTC GGTCTACGCG GCGCGGCACA ACTGATGCCG AGCGAGCTAT CGGGTGGCAT GGCAAGACGC GCTGCGTTGG CGCGTGCGAT CGCCCTGGAT CCTGATTTAA TCATGTATGA TGAACCATTT GTCGGACAAG ACCCAATCAC CATGGGTGTC TTGGTTGAGC TCATTAGTAA TCTAAATCAA GCGTTAGGTT TAACTTCTAT AGTCGTTTCT CACGACGTGC CTGAAGTAAT GAGTATTGCC GATTGGGTTT ATCTGATGGC CGATGGCAAA ATTATCGCTT TTGGCACACC AGAAGAGCTT AATCAGAATC CTGACCCTCG CGTTCAGCAG TTCTTACAAG GTGATGCAGA TGGTCCTGTA CCGTTTCGCT TCCCTTCTCA AAGTATCGAA AAGGACTTAT TTGATGGTCG ATAA
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Protein sequence | MSNNDLVTVN NLTFSRGERK IFDGIDLHVP EGKVTAIMGP SGIGKTTLLR LIGGQLYPEQ GEIWFDGDNI PSLSRKKLYH ARKKMSMLFQ SGALFTDLNV FDNVAFPLRE HTNLSEELIR TMVLLKLEAV GLRGAAQLMP SELSGGMARR AALARAIALD PDLIMYDEPF VGQDPITMGV LVELISNLNQ ALGLTSIVVS HDVPEVMSIA DWVYLMADGK IIAFGTPEEL NQNPDPRVQQ FLQGDADGPV PFRFPSQSIE KDLFDGR
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