| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002405 |
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| Symbol | |
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| ID | 8556100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 879081 |
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| End bp | 879575 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405463 |
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| Product | LptA protein |
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| Protein accession | YP_003285032 |
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| Protein GI | 262393178 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.122787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT TACACCTTAG CCTACTGGCA CTGGTATTGG CGGCGCCTCA AGCGCTGGCA
CTTAAGTCGG ATACTCAACA ACCGGTTTAC ATTAACTCTG ACACCCAACA GGTGGATATG
AAGAGTAACC AGGTTATCTT TAAAGGCGAT GTATCTCTTA AGCAAGGTAG CATCAATATC
GATGCTGATA GAATCGTGGT AACGCGCGAT CCTAAAACCG AAGCCATCAA ACAGATTCAA
GCATTTGGTA AACCTGCGAA GTTTTCTCAG CTGATGGACG ATGGTAAGAC ACTGAGTGGT
CAAGCTGTGG AGCTGGATTA CCGTATTTCT ACAGACGAAT TGACCATGAA AGGTCAAGCG
CAACTGGCAC AAGACAACAA CACCATCAAA GGTTCTTCGA TTCGTTACCA AATTGGTAAA
CAAAAGCTAG TCGCTGATAG CTCTAAGGAA GAGCGCGTTA CGACCATTTT GCAACCCAAT
CAGATAGAGA ACTAA
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| Protein sequence | MKPLHLSLLA LVLAAPQALA LKSDTQQPVY INSDTQQVDM KSNQVIFKGD VSLKQGSINI
DADRIVVTRD PKTEAIKQIQ AFGKPAKFSQ LMDDGKTLSG QAVELDYRIS TDELTMKGQA
QLAQDNNTIK GSSIRYQIGK QKLVADSSKE ERVTTILQPN QIEN
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