| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002397 |
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| Symbol | |
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| ID | 8556092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 872005 |
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| End bp | 873348 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405455 |
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| Product | PmbA protein |
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| Protein accession | YP_003285024 |
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| Protein GI | 262393170 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA AACAGCAGGT TGCTGAGCAA CGTACCGAGC TAGAGCAAGC CGTCGCAAGA
GCCTTAAAGC TTGCATCGGC AAAATCTGAC GCCGCCGAAG TCGCAATTAC CAAAAGCACT
GGTTTAAGTG TATCTACTCG CATGGGCGAG GTAGAAAATG TCGAGTTCAA CAGCGATGGT
GCGCTGGGCA TTACCGTTTA CCGAGGTCAA CGTAAAGGCA GTGCTTCCAC GTCTGATTTA
AGTGAAGCTG CTATCGAGCA AACCGTTATT GCGGCGCTGG ATATTGCGCA TTACACATCT
GAAGATCCAT TTGCAGGGCC CGCAGCCAAA GAATACATGG TGCAAGAGAT CCCTGAGCTT
GATCTTTTCC ACCCAGACGC CCCTGATCCC GATTATGCTG CCGATGTGGC GATCGCCGCT
GAGAAAGAAG CGTTAAGTTA TAACAGTGCA ATCAAGCAAA GTGATGGCGC GAGTTATGAT
AGCCACTACG GTGTAAAAGT GTATGGTAAC AGCCATGGCT TATTAGCAAG CTATGCGTCT
AGCCGCCACA GTACCAGCTG TTGTGTGATT GGCGTTGGTC AAAATGGCGA AATGGAGCGT
GATTACAGCT ACACAGTGGC ACGTCATCGC GATGACTTAT GGACACCAGA AACAGTGGGT
CGTAAGGCGG CAGAGAATAC GATTAACCGC TTAGATGCGC AGCGCTTAAA GACAGGTAAA
TACCCAATCA TGTTTGCCGC TGATGTTGCA ACTGGCTTGA TTGGCCATCT CGTTATGGCG
ATCAGCGGTG GTAACCTGTA CCGAAAATCT TCTTTCTTAC TTGACCATCT AGGCAAACAA
GTGCTTCCTG AATGGTTCAA TATCTCAGAA CGTCCGCATG TATTGCGTGG TTTGGCGTCA
AGCCCATTCG ATAGCGAAGG CGTATATACT CAAGACCGTG AGATCATTAC TGACGGTGTG
CTAGCAACTT ATCTGTTAAC CAGTTATGCC GCACGTAAAA TGAAGATGGC GCCGACAGGT
CACGCTGGTG GCATCCATAA CTGGTACGTG AAATCGACGG GTCAAAACTT CGAACAAATG
CTTAAAGAGC TCGGCACTGG TTTGTTAGTG ACAGAAGTGA TGGGGCAAGG CGTGAACGTG
GTAACAGGTG ATTACTCTCG CGGTGCTGCA GGCTTCTGGG TTGAGAACGG TGAAATCCAA
TACCCAGTAT CGGAAATTAC CATCGCTGGT AATCTGAAGG ACATGTTCAA TAAGATTGTT
GCCGTAGGTA GCGACGTTGA AACGCGCTCG CAAATTCAAA CGGGTTCAAT CTTACTGGAT
GCGATGAAAG TTGCAGGTGA GTAA
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| Protein sequence | MDIKQQVAEQ RTELEQAVAR ALKLASAKSD AAEVAITKST GLSVSTRMGE VENVEFNSDG
ALGITVYRGQ RKGSASTSDL SEAAIEQTVI AALDIAHYTS EDPFAGPAAK EYMVQEIPEL
DLFHPDAPDP DYAADVAIAA EKEALSYNSA IKQSDGASYD SHYGVKVYGN SHGLLASYAS
SRHSTSCCVI GVGQNGEMER DYSYTVARHR DDLWTPETVG RKAAENTINR LDAQRLKTGK
YPIMFAADVA TGLIGHLVMA ISGGNLYRKS SFLLDHLGKQ VLPEWFNISE RPHVLRGLAS
SPFDSEGVYT QDREIITDGV LATYLLTSYA ARKMKMAPTG HAGGIHNWYV KSTGQNFEQM
LKELGTGLLV TEVMGQGVNV VTGDYSRGAA GFWVENGEIQ YPVSEITIAG NLKDMFNKIV
AVGSDVETRS QIQTGSILLD AMKVAGE
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