Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002396 |
Symbol | |
ID | 8556091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 871367 |
End bp | 871894 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405454 |
Product | putative alpha helix protein |
Protein accession | YP_003285023 |
Protein GI | 262393169 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACGTA AGAATCAAAA AGCGCCATGG GAACCAGAAG AAGAGATCAT CTGGGTAAGC AAATCCGAGA TGAAGCGAGA CATGGAAGAA CTGCAAAAGC TAGGTGAGGA GCTTGTCGGC CTCAAACCTG CAGTTCTCGA AAAGTTTCCA TTGAGCGAAG ACCTGCGAGA AGCAATTGCA GACGCACAAC GCTTTAAAAA CGAAGCACGT CGTCGCCAAT TACAACGTAT TGGTAAGTTG ATGCGTTATG AAGATCCAGA GCCAATCCAA GCGGCGTTGG ATAAGATTCG TAACAAGCAC TCTCAATTAA CGGCGGTATT CCACAAGCTT GAAGCTCTGC GTGATCGCGT GGTAGAAGAA GGCGACAAAG CCATTGATGA CGTAATGGAA ATGTACCCAG AGGCGGATCG TCAGCGTCTA CGCCAATTGG CTCGCCAAGC AGCGAAAGAG AAAAAGGCTG GGAAACCAGC AAAAGCGTAC CGCGAAATCT TCCAGATCCT AAAAGGTCTG AACGAAGAAG AGTTTTAA
|
Protein sequence | MARKNQKAPW EPEEEIIWVS KSEMKRDMEE LQKLGEELVG LKPAVLEKFP LSEDLREAIA DAQRFKNEAR RRQLQRIGKL MRYEDPEPIQ AALDKIRNKH SQLTAVFHKL EALRDRVVEE GDKAIDDVME MYPEADRQRL RQLARQAAKE KKAGKPAKAY REIFQILKGL NEEEF
|
| |