Gene VEA_002396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002396 
Symbol 
ID8556091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp871367 
End bp871894 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID646405454 
Productputative alpha helix protein 
Protein accessionYP_003285023 
Protein GI262393169 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA AGAATCAAAA AGCGCCATGG GAACCAGAAG AAGAGATCAT CTGGGTAAGC 
AAATCCGAGA TGAAGCGAGA CATGGAAGAA CTGCAAAAGC TAGGTGAGGA GCTTGTCGGC
CTCAAACCTG CAGTTCTCGA AAAGTTTCCA TTGAGCGAAG ACCTGCGAGA AGCAATTGCA
GACGCACAAC GCTTTAAAAA CGAAGCACGT CGTCGCCAAT TACAACGTAT TGGTAAGTTG
ATGCGTTATG AAGATCCAGA GCCAATCCAA GCGGCGTTGG ATAAGATTCG TAACAAGCAC
TCTCAATTAA CGGCGGTATT CCACAAGCTT GAAGCTCTGC GTGATCGCGT GGTAGAAGAA
GGCGACAAAG CCATTGATGA CGTAATGGAA ATGTACCCAG AGGCGGATCG TCAGCGTCTA
CGCCAATTGG CTCGCCAAGC AGCGAAAGAG AAAAAGGCTG GGAAACCAGC AAAAGCGTAC
CGCGAAATCT TCCAGATCCT AAAAGGTCTG AACGAAGAAG AGTTTTAA
 
Protein sequence
MARKNQKAPW EPEEEIIWVS KSEMKRDMEE LQKLGEELVG LKPAVLEKFP LSEDLREAIA 
DAQRFKNEAR RRQLQRIGKL MRYEDPEPIQ AALDKIRNKH SQLTAVFHKL EALRDRVVEE
GDKAIDDVME MYPEADRQRL RQLARQAAKE KKAGKPAKAY REIFQILKGL NEEEF