Gene VEA_002395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002395 
Symbol 
ID8556090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp870317 
End bp871279 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content48% 
IMG OID646405453 
ProductD-lactate dehydrogenase 
Protein accessionYP_003285022 
Protein GI262393168 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGC CGACCATCGT ATTTTTGGAC CGAGCGACCA TCCCAGAACA TATTGAGATC 
CCACGACCTA GCTTTCAGCA CCACTGGCGT GAGTACGACT TAACCGCGCC AGAGCAGGTA
ATAGAAAGGT TAGCAGATGC AGATATCGTG ATTAGCAATA AAGTCCTGCT TGACCAAAAT
ATATTAGAGC AACTACCACA ATTGCGGATG ATCGCGGTTG CCGCGACTGG TTTTAATAAC
GTCGATGTGG ACTACTGTGC TAAGCATGAT ATTGCGGTTG CCAATGTACG TGGTTACGCG
ACGCGTTCGG TGCCTGAGCA CGTGATTGCG ATGCTGTTTG CTTTACGCCG AAATTTATTT
GGTTACCATC AAGATATTGC CGCTGGCGAA TGGCAGCGTA ATAAGCAGTT CTGCTTTTTT
ACGCACCCAA TCGGGGATAT AGGTGGTAGC ACGTTAGGTG TTGTTGGTAG TGGGGCGCTG
GGGCAAGCGA CGGCGAATCT AGCTCAAGCG TTAGGAATGA CCGTGTTGTT TTCTGAGCGT
AAAGGGGCGG CAGAATGTCG ACCTGGTTAT GTGCCGTTTG AGGAAGTGTT AAAACGTTCT
GATGCGTTGA CTTTGCACTG TCCGCTCAAC GAGCATACTC AGAATTTAAT TGGTCAAGCA
GAGTTGCAAC AAATGAAGCC CAACGCCATT CTAATTAATA CGGGGCGTGG AGGCTTGGTG
AATGAGGAAG CGCTGGTGGA TGCCCTAAAA CAGGGAGAAA TTGCTGCGGC TGGCTTTGAT
GTTTTTACAC AAGAACCAGC AGATGAGAGC AATCCGCTGA TTGCCAATAT GGGTTTACCT
AATTTGTTAC TTACACCGCA TGTTGCATGG GGCAGCGACT CATCGATTCA ACGTTTAGTG
GAAATCTTGA TTGAGAACAT TAACGCTTTC GAGCGCGGAG AGCGTATTAA TCGCTTGGTG
TAA
 
Protein sequence
MSLPTIVFLD RATIPEHIEI PRPSFQHHWR EYDLTAPEQV IERLADADIV ISNKVLLDQN 
ILEQLPQLRM IAVAATGFNN VDVDYCAKHD IAVANVRGYA TRSVPEHVIA MLFALRRNLF
GYHQDIAAGE WQRNKQFCFF THPIGDIGGS TLGVVGSGAL GQATANLAQA LGMTVLFSER
KGAAECRPGY VPFEEVLKRS DALTLHCPLN EHTQNLIGQA ELQQMKPNAI LINTGRGGLV
NEEALVDALK QGEIAAAGFD VFTQEPADES NPLIANMGLP NLLLTPHVAW GSDSSIQRLV
EILIENINAF ERGERINRLV