| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002394 |
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| Symbol | |
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| ID | 8556089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 869471 |
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| End bp | 870223 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405452 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_003285021 |
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| Protein GI | 262393167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGC TTGAATATAC CCCTCCCACC GATCCTTGGG TCGATATCGT TTTTGAGGAT
GACGACATTC TGGCAGTGAA TAAGCCATCA GGGTTGCTGT CTGTTCCTGG TCGCCTTGCA
GAGCATTACG ACAGCATGTG GAGCCGCCTC AAGGAAGTGC ATCCAGAAAT CCAAGTAGTG
CATCGCTTGG ATATGTCGAC ATCAGGGCTG ATGCTGCTGG CGAAAAACAA ACCTTCGGAG
CGAGCATTAA AAAAGCAGTT CCAATATCGT CTCACCCACA AGGTGTATTA CGCACGTGTT
TGGGGGCATG TTGAGCCGCA AGAAGGGAAT ATTGACCTTC CATTAATTTG TGATTGGCCA
AATCGTCCGC GACAAAAAGT ATGCTTCGAC GACGGCAAGC CATCTCAAAC TTTATTCCAA
GTGGTGAAGC GTGAAGTGCA CTCTGATGGC ACCCATACGA CCGTTGTGCG ACTACTGCCC
ATTACTGGTC GATCGCATCA GTTACGCGTG CATTTGATGG CGATTGGTCA TGCGATTGTG
GGTGATGAGT TTTATGCAAC TGAAGAGGCG TATCAGTTTT CAGAACGTTT AGAGTTGCAC
GCTGCGGAGC TAAGTTTTTA TCACCCAGCC ACGGATCAGC TGAGCAGTAT TTTTGTACCC
TGTGACTTTT ATCCTGAAGC TGAGGCGATG ATCTTTAACT ATTTTTCGCC AGAACGTACA
TTGCCTGATT ATAAAACGTT GCCACACCCT TAA
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| Protein sequence | MAMLEYTPPT DPWVDIVFED DDILAVNKPS GLLSVPGRLA EHYDSMWSRL KEVHPEIQVV
HRLDMSTSGL MLLAKNKPSE RALKKQFQYR LTHKVYYARV WGHVEPQEGN IDLPLICDWP
NRPRQKVCFD DGKPSQTLFQ VVKREVHSDG THTTVVRLLP ITGRSHQLRV HLMAIGHAIV
GDEFYATEEA YQFSERLELH AAELSFYHPA TDQLSSIFVP CDFYPEAEAM IFNYFSPERT
LPDYKTLPHP
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