| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002390 |
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| Symbol | |
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| ID | 8556085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 861394 |
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| End bp | 862839 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405448 |
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| Product | TldD protein probably a protease |
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| Protein accession | YP_003285017 |
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| Protein GI | 262393163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA ACCAAATAGA ACAGGCACTC CTTGCCCCAA ATGGTCTGAC AGAACAAGAC
ATTGCTGACA CGCTTGCCAG CATTGCGACA CGCCAGATCG ATTATGCGGA CATTTACTTT
CAGTCCAGCT GGCATGAGTC TCTGGTTCTA GAAGACAGCA TCATCAAAGA TGGCTCTTTT
AACATTGATT GTGGTGTTGG TGTCCGTGCG GTAACTGGTG AAAAAACCGG CTTTGCCTAC
TCTGATCAAA TCCAGCCTGA AGGTCTGAAG CAGAGTGCAA TGGCGGCGCG CGGTATTGCT
CAGCAAGGGC AAAATGGCAA AGTTCAAGCG TTTAAACGCA CCGAAAACCA AGCGTATTAC
GCGGCTGTGA ATCCACTAGC TGAATGGGAA AAGCAGCAAA AAACAGAATT ACTCAAGTCT
CTAGATGCTT ACATCCGCAC TAAAGAACCA TTGATTAAAG AAGTCTCGAT CAGCATCAGC
GGTGTGCATG AGCAGATGCT TGTTGCGGCA ACAGACGGTA CTTATGCAGG CGATATTCGT
CCTTTGGTAC GTTTGTCTAT TAGCGTGCTC GCTCAAAAAG GTGAACGACG TGAACGCGGT
AGCGCTGGTG GCGGTGGCCG TTTCGGTTAC GATTTCTTTT TAACGGAAAG CAATGGTGTG
AAACAAGCTT TCCATTATGC AGATGAAGCG ATTCGCATGG CGTTGGTAAA CCTTGAAGCA
GAAGCCGCAC CAGCAGGCAT GATGCCAGTG GTATTGGGCT CAGGTTGGCC AGGCGTATTG
CTACATGAGG CGGTAGGTCA TGGCCTAGAA GGTGACTTTA ACCGCAAAGA GTCGTCAGTG
TTCTCTGGAA AAATGGGTCA ACAAGTGACG TCTTCACTGT GTACCATCGT CGATGACGGC
ACGTTAAAAG ACCTTCGTGG TTCACTGAAT GTGGATGATG AAGGGGTAAA CGGCCAGTAC
AACACGCTTA TCGAAAATGG TGTGCTGAAA GGTTACATGC AAGACAAGCT AAACGCGCGG
TTAATGGGTG TGAACCCAAC AGGTAACGGT CGTCGTGAGT CGTATGCACA TTTGCCAATG
CCTCGTATGA CCAACACCTA CATGCTTCCA GGTGAACATA CGCCAGAAGA AATTATCTCG
ACGGTCGAGA AAGGGTTGTA TGCGCCAAAC TTTGGTGGCG GCCAGGTGGA CATTACTTCG
GGTAAGTTTG TGTTCTCTGC ATCCGAAGCA TACTTGATTG AAAACGGTAA AATTACGCGC
CCTGTTAAAG GTGCGACGTT GATTGGCTCA GGTATCGAAG CAATGCAGCA AGTGTCTATG
GTCGGTAACG ACCTAAGTAT CGACAAGGGC GTTGGCGTAT GTGGTAAAGC AGGTCAAAGT
GTACCTGTTG GTGTTGGTCA GCCGACCTTG AAGCTGGACT CACTGACGGT GGGTGGCACT
GAGTAA
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| Protein sequence | MSTNQIEQAL LAPNGLTEQD IADTLASIAT RQIDYADIYF QSSWHESLVL EDSIIKDGSF
NIDCGVGVRA VTGEKTGFAY SDQIQPEGLK QSAMAARGIA QQGQNGKVQA FKRTENQAYY
AAVNPLAEWE KQQKTELLKS LDAYIRTKEP LIKEVSISIS GVHEQMLVAA TDGTYAGDIR
PLVRLSISVL AQKGERRERG SAGGGGRFGY DFFLTESNGV KQAFHYADEA IRMALVNLEA
EAAPAGMMPV VLGSGWPGVL LHEAVGHGLE GDFNRKESSV FSGKMGQQVT SSLCTIVDDG
TLKDLRGSLN VDDEGVNGQY NTLIENGVLK GYMQDKLNAR LMGVNPTGNG RRESYAHLPM
PRMTNTYMLP GEHTPEEIIS TVEKGLYAPN FGGGQVDITS GKFVFSASEA YLIENGKITR
PVKGATLIGS GIEAMQQVSM VGNDLSIDKG VGVCGKAGQS VPVGVGQPTL KLDSLTVGGT
E
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