| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002387 |
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| Symbol | |
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| ID | 8556082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 855140 |
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| End bp | 856609 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405445 |
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| Product | cytoplasmic axial filament protein CafA and Ribonuclease G |
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| Protein accession | YP_003285014 |
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| Protein GI | 262393160 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG AATTGCTGCT TAACGTGACC CCGAGTGAAA CTCGTGTGGC CATGATTGAA
GGTGGAGTAC TACAAGAAAT ACATATCGAG CGCGAATCGC GTCGTGGCAT TGTGGGCAAT
ATATACAAAG GCAAAGTCAG CCGAGTACTG CCAGGTATGC AAGCGGCTTT CGTCGATATC
GGTTTAGATA AAGCGGCGTT TTTACATGCG TCAGATATTG TCCCGCATAC CGAATGTGTG
GCAGAGAACG AAAAACAGCA GTTTCAAGTC CGTGATATCT CTGAGCTGGT ACGTCAGGGG
CAAGACATTG TTGTACAAGT GGTCAAAGAT CCGCTCGGTA CGAAAGGCGC GCGTTTAACG
ACGGATATCA CCTTACCTTC GCGTTATCTT GTTTTTATGC CGGGGGCCAG TCATGTCGGT
GTTTCGCAGC GTATTGAGAG TGAGAAAGAG CGCGAGCGTC TGAAAAAAGT GGTGAATCAT
TACTGTGATG AGCACGGTGG TTTTATCATT CGTACCGCAG CGGAAGGCGC AGATGAAAAA
GAGCTTTCTC AAGACGCGGC ATTTCTTAAG CGCTTGTGGC TAAAAGTCAT GGAGCGTCGT
TCAAAATACA AAACACGTTC AACGCTTTAC GGTGAACTTG GTTTAGCCCA GCGCATTCTA
CGTGATTTTG TCGGCACAGA GCTAGATAAA ATCATGGTCG ACTCCCGCCT CGAATATGAA
AACCTGAAAG AATTCACTTC TGAGTATGTA CCTGAGTTAA CAGACAAGCT TGAGCTTTAC
GAAGGTGACA AGCCAATCTT TGACATGTAC GACACCGAGA ATGAAATTCA GCGCTCCTTA
GAGCGCAAGG TTGAGCTAAA GTCGGGTGGC TATTTGATCA TTGATCAAAC TGAAGCTATG
ACAACTATCG ACATCAACAC TGGTGCATTT GTTGGTCGTC GTAATCTTGA AGAGACCATC
TTTAATACCA ACATTGAGGC AACGCAAGCT ATTGCTCGTC AGCTGCGTTT GCGCAATCTC
GGCGGCATCA TCATTATCGA CTTTATCGAT ATGGCGTCTG AAGAGCACCG TCAGCGAGTG
CTCACCTCAT TGGAAACCGC ACTGGCTAAA GATCGAGTAA AAACCAACAT CAACGGCTTT
ACTCAGCTCG GCTTAGTCGA GATGACGCGT AAGCGCACAC GAGAAAGTAT TGAACATATC
TTGTGTTCTG GCTGTCCTAC TTGTGAGGGC CGTGGCAGTG TGAAAACGGT TGAAACCGTG
TGCTTTGAGA TATTACGCGA GATTACTCGT GTAAACCGTG CTTACGACGC CGATAATTTT
GTTGTGTACG CATCGCCGTT TGTCGCTGAA GCGCTGTTGG GTGATGAGTC TCATGCATTG
GCTGAGCTCG AAGTATTTAT TGGCAAGCAA GTGCGAGTTC AGGCTGAGCC CCTGTACATT
CAGGAACAGT TTGACGTCGT AATGATGTAA
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| Protein sequence | MSAELLLNVT PSETRVAMIE GGVLQEIHIE RESRRGIVGN IYKGKVSRVL PGMQAAFVDI
GLDKAAFLHA SDIVPHTECV AENEKQQFQV RDISELVRQG QDIVVQVVKD PLGTKGARLT
TDITLPSRYL VFMPGASHVG VSQRIESEKE RERLKKVVNH YCDEHGGFII RTAAEGADEK
ELSQDAAFLK RLWLKVMERR SKYKTRSTLY GELGLAQRIL RDFVGTELDK IMVDSRLEYE
NLKEFTSEYV PELTDKLELY EGDKPIFDMY DTENEIQRSL ERKVELKSGG YLIIDQTEAM
TTIDINTGAF VGRRNLEETI FNTNIEATQA IARQLRLRNL GGIIIIDFID MASEEHRQRV
LTSLETALAK DRVKTNINGF TQLGLVEMTR KRTRESIEHI LCSGCPTCEG RGSVKTVETV
CFEILREITR VNRAYDADNF VVYASPFVAE ALLGDESHAL AELEVFIGKQ VRVQAEPLYI
QEQFDVVMM
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