Gene VEA_002385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002385 
Symbol 
ID8556080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp854059 
End bp854547 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID646405443 
Productrod shape-determining protein MreD 
Protein accessionYP_003285012 
Protein GI262393158 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.181235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATA ATGTAGTGAG TAGCCGAATG GTGATTGGTG TCAGTTTCTT CGTTGCGCTG 
GTATTGCAAA CCATTCCGTG GCCAGGTGTG TTAGATGTTT TACGTCCATC ATGGTTGTTC 
CTTGTCACGT GTTATTGGGT GTTGGCACTG CCGCACCGAG TGAACGTTGG AACCGCGCTA 
GTGCTGGGCT TATTATGGGA TATCTTGATC GGCTCAACGC TTGGAATTCG CGGCATGATG 
ATGTCGATTG TCATCTATCT GGTGGCGTTG AATTTCCTAT TGATTCGTAA CATGGCATTG 
TGGCAACAGT CGATTTTAAT TGCCTTTTTT ACTGCGTTAT TGGAAGTTTT GATATTCTGT 
GGGGAATATT TGAACCAGGA CGTAGTATTT AATCCATTAT CTCTGTGGAC GGCAGCAATA 
AACTGTATAC TTTGGCCATG GATGTTTTTA TTAATGCGAC GAGTTCGTCG TGCATGGCAC 
GTAAGGTAA
 
Protein sequence
MANNVVSSRM VIGVSFFVAL VLQTIPWPGV LDVLRPSWLF LVTCYWVLAL PHRVNVGTAL 
VLGLLWDILI GSTLGIRGMM MSIVIYLVAL NFLLIRNMAL WQQSILIAFF TALLEVLIFC 
GEYLNQDVVF NPLSLWTAAI NCILWPWMFL LMRRVRRAWH VR