Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002382 |
Symbol | |
ID | 8556077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 847298 |
End bp | 851824 |
Gene Length | 4527 bp |
Protein Length | 1508 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646405440 |
Product | hypothetical protein |
Protein accession | YP_003285009 |
Protein GI | 262393155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAA TACTATTTGC CTTAGCTTTG TTGTCTTCAA GTAATTTGTC TTATGCGGAT GAATGGGAAG GTACGGAGAC TTGCTCTGTT AAAATGGACG CCCCATTTTT TGTCGAAGCC AATTACTATG ATGATGATTG GTTCGACTGG CTGTCTCGAG ACTCAGACAT TGAAGACGAA GTGATCTATC TCAAAAAACA AGGTCAAGGC AACGTTTCCT TATACCCACT ATGGTCTGCT GACGATGATG TTGACGGGAT ATTTAACGAA CATTCGCTTT CCAACAGAAC GTTATACTCT ATTCGTTTGG AATACAGCAA CGTAAGAAAG CAAGGCAATA GTTATACTGG GGATTTGAAC TACTACCTAC GCTCTTCTAG TGGTTCATTG ATACGTCAAG AAACTGTATT CGATAATGTT TTCTCTAAAA TGTCGAATAG TGCTGATGTT TTGATTGAGA AAGGCGAAGA ACTCAAAACT CTGCGATGTG GTGAACTTGA GGGACCATCA CCAACACCTG AACCAGAAAT TACTGTACCA GAACAAGTTT GTGAAGTCTT TCCTGAGCCT ATTCAAGGTT GGAAAAATGA AGTCAGCCAG TTAATTGTTA CTAACTCAAC TGTAGGCACT TTGGGGTGGT CTCCAGAGTA TATTGCTGAT AGACAGAATA TTTATGAGTA CTCTAATTCT AATGGTCAAT CTTGGAACAC GTTACGAGTG GGCTTTGATA AGGGAGAAGG GGCATGGCAG CTATATGAAA ACTCAAGCTC AACCATCTGT GATGATCGGA TGGGATGTTA TCCTGGTGAT GCCCAGCCTG ATGGAAATGA CGGTTTAATT GAAAAGCGTA AAGCCCAAAC TCCGGCTTCA GTTAACGCTT TATTTGACTC ATCTCAAGAC CTAATTATTC GTACACAAGA TACGGATTCA AACTATTACG GTAAGGTTTG TTCTTCTAAT TCGACTCTAT GTGAGTACAG CAACCTGACC GACAAAGTCG TTATTCGACT GAAAAGCGAT TTGAACTCTC TCGACATTAA CGGATATGGT TCAGAAAAAA GTGTTGAGCT TCAAATTGAT GGTACTAGGG AAATTAAAAG CTTTGCCTAT GATGCTGGTA ATAACCTCTC CCTGTATTTT AGTGATGACG CCAAGCTGAC GGTGAAGACG TTTAGAAATA CTGGCTCTGA TCCGAAATTG ATTTTTGGTA GTGACGTAAT CTTCAATGTT GTGGGAACGA ATCAGCCTGT TGGCCCTGTG ACATCTGCAG ACTTTAAATT AGAGGATGCC CATTTTGATT ATCGTACTTT TAAAGATGAC CTTGTTTTGC CAATTATTTA TGGTCCAGAA GCCAGCGTAC ATTTCAAAAC CGACTCTGGT CAGGTGTTCA AAGGATTTGT TCTAGCTAAA AGCATTATGC TTGATACTAG CGAGCATATT TATGGGGCAA TTACGAGTCT CAGACTTGAT ATGCGTGGCT CAACAAAAAT TGAGAAACCA AAATACCCAG AATCCTGTTG GGTTCCACCA GAGCCTCAAC AGTGTACTTA TCTACCCAAA GAGACGTTTG ACAATGGCAG CGTACTAACC AACTGGTCTG TTATGGGGTT TGGTGACAGT GTTGACCCTA AAATTCACGG TGGCAAGTTC CGTCTGAATG ATGATAGAAC GCGTCAAGCT ACAGCATCTG CTTATAACTA CATTTTCCCT TCGGATCAAA ACTATCTTGA AATCGAGTTT GAGCATTATG CATACGGTAT TAATCGTGGT GGCGGTGATG GCATTGCTTT AGTTATCTCT GATGCGAACG TACCGCCTAA AACGGGTGCT TTTGGAGGCC CTCTTGGCTA TGGGATGAAA CTAAAGAAAA ACCATGGTGG TGAGGTTAGT AGTGATGTTG AAGGATTTGC TGGTGGTTGG CTGGGTATAG GCATTGATGA GTACGGCAAT TTCTATCGCG AAGGTGGAGA AACTATCTCA AATCGAAATG GTAGACCAGA TAGTGTAGGT ATTCGTGGGT CGGGTGCTCA AGATAACCAA GGAAAATGGT TAAAAGGATA CGCATATGTT GATGGCACGC AGTTTTCGAG CTCCATCGAC AACCATCACG ATTTACATCG CTATAAGATC ACTCTGAATT CAAGAGATGG TCAGCATATG ATGTTGAAAG TTGAAAGAAG TATTAATGGT GGAGAATGGA ATACTGTTAT TTCAGATTTT GATGTGCGAA CAGAAGGGCA CTTTAGCCAA GCTCCAACAA ACTTCCGTTT GTCAGTAACG GCATCAACAG GTGCTGCAAC GAACTTTCAT GAAGTGGATA ACTTCCAAGT CTGTGCGGAC AAGTACTCGC GATTAACAGA TGGTATTCAT CATTTCGAGT TTGACTACTC TGGCTCGGGC AGTACGTGTC AGGCTTCTGA TGTGACACTT AGAGCTTGTA TGAATGAAAG TTGTTCTGAG CAATATCCTA GAGATGCATA CGATGATGGC AGCTTAACGC CTCTCTCTGT CACTTTACTT CCATCTGTTG GCAATAATGT TGCCAACTGG GTTGGCGGTA CAAATGTACA GTTTGAGAAT GAAACTCAGC TTGAGCTGCA AGGTTCAAGA GCTGGCGATG TTACTTTAGG TATCGACCAA AGTTCCGTAC CACAGTTTGG CTTTGAAGGG GCGCGATGTC GAATTAATGG CGGTCCACTA TCTGCTAACA ACTGTAATGT AACCTTCGCT TCAAATGTGC TCGCGGTGAA TGTTAATGAT GTAGTTGCTA GTCGCGAAAC TACGGGTGAG GATTACCTAT CGTTTTGCTC AACTCGAACA GAAGACGGCG GTGAATCTCG CGGTGTTAAT ATGTCGATTG ATTATGAAGT GGCACCGGTC GATAGCTCTC AACCTGTCGT GATTTCTTAC AAGAAAAAAG TGAAAGATCA GGCTGTGGAA TGGAGTTCAG ATGTCGAGCT AACCAAGGCT AATAAATACC TGCCTAATGT TTATTTTGAT GATGAAGGCA AGGCATTCTT TAAGTTGAGA TACGCTGAAG CTGGAAAGGT CAAACTTAAA GCCAGTGTTG AAGGCGTTGA TGACTCGGAT GGATTCGGCA GCTTCGTTAG TTTTCCTTCA AAACTGAAAG TGACTGCAAA GAGTGGTGAT AAGAGCGGAG AGTGCACCAA CAGTGAAAAT GGCTGTTCTT CGGGGTTTGT TGCTGCTGGT GAAGTTTTTG AACTAACTAT TTCTGCGCTG CAGGATGACG GTTCAGTTGC TGAGAACTAT CAAGAGAAGA CTATTACGGT TAGTAATAAA GTGAAGTACC CGTCTAATGG TTCATTAGCC AAACTTCTGA ATGAGAGATT ACCAGAATCA AGTAAATGGT CTGGCGGTAA TGTGAAGTTT GACCAATCGG TTTCAGAAGT CGGTGTTTTC GAGCTTATTG CTGAGGCACC AGTTGCTAAA GATGAAAATG GCGATGATAT TGGGACATCT CTGTATCTTG GCAGCAAAGC TTTTAAAATT GCAGATGGCA AGTCAACAAT TGGTCGCTTC TATCCTGATT ATTTTAAAGT AACAGGAACC GAGTGGACTT ATCCTGATAA TCAGAATGAC TCTGTTTATA TGGGGCAAAA CTTTGCGTCA GTTAAGTTTG AAGTCACCGC ATATAACGCT GATGGGTATG CTACGCAGAA CTATGGTAGT TTTGCCGATT CTTTGAAAGC AGACTTGTAT TTAGCTGGAA GCTTTTCTGA CCGACTGAGT ATCTTGGACT CTGATCTAAC GAGTAAAAAC TGGTCTGGTG CGATTTGGAG TAAAACCTGG GTTAATTCTG TTGATTGGAG CAAAGCTGCT AATTTAGATG GTCCATTTAA CTCCAAAGTA TCAACAGATA GTTCTACTGA GTCATCAATT GCGTTGTCTC TTAATAAGAC AGCGAGTACG AAGACAGCAC ATATTGACCC AACTCTATTT CTGACAGAAG GTAATGATGG CAAACAATCT CGTACCGTAG AGCAACAACT GTTATCTCAA CCTGATGTTA GGTATGGGCG TATGGTTTTA GATGATATTG GCGGAAGACA AGGGGATACA CTCAGCATTC CTCTTAAAGT TGAGTACTGG AATAAGAACC GATTTGTTGT CAATTCTGAG GACAACCGAA CGGCCGTTTC TGCTGTAGAA CAAGGCGATG ATAAACTGAT TTGGAGCAGT CCAGATGGTG TTACTGCCTG TGATATCAAT ATTCAAGTTC TTGATTCAGC AGACAGTGAA ACATCCAGTG CTAAAGTTAC CGGGGGCATA TTACCAAATG CAAATAGAGA GCGTTTAACC GCTGTACAAG GTTGTGATAA TGAAGTTCGA CAGCAATCAC AAGTTTGGTT AGATCTTGAT GACTCTGAAA ATGGCTTACC TTGGCTCAAA TATGATTGGG ACAATGATGG CTCCGAAGAA AACCCATCCA CCGTCGTCAC CTTCGGTATT CACCGTGGTA ATGACCGTGT GATTTACCGT GGTGAGCCTG GGTTAACCGG ACAGTAA
|
Protein sequence | MRKILFALAL LSSSNLSYAD EWEGTETCSV KMDAPFFVEA NYYDDDWFDW LSRDSDIEDE VIYLKKQGQG NVSLYPLWSA DDDVDGIFNE HSLSNRTLYS IRLEYSNVRK QGNSYTGDLN YYLRSSSGSL IRQETVFDNV FSKMSNSADV LIEKGEELKT LRCGELEGPS PTPEPEITVP EQVCEVFPEP IQGWKNEVSQ LIVTNSTVGT LGWSPEYIAD RQNIYEYSNS NGQSWNTLRV GFDKGEGAWQ LYENSSSTIC DDRMGCYPGD AQPDGNDGLI EKRKAQTPAS VNALFDSSQD LIIRTQDTDS NYYGKVCSSN STLCEYSNLT DKVVIRLKSD LNSLDINGYG SEKSVELQID GTREIKSFAY DAGNNLSLYF SDDAKLTVKT FRNTGSDPKL IFGSDVIFNV VGTNQPVGPV TSADFKLEDA HFDYRTFKDD LVLPIIYGPE ASVHFKTDSG QVFKGFVLAK SIMLDTSEHI YGAITSLRLD MRGSTKIEKP KYPESCWVPP EPQQCTYLPK ETFDNGSVLT NWSVMGFGDS VDPKIHGGKF RLNDDRTRQA TASAYNYIFP SDQNYLEIEF EHYAYGINRG GGDGIALVIS DANVPPKTGA FGGPLGYGMK LKKNHGGEVS SDVEGFAGGW LGIGIDEYGN FYREGGETIS NRNGRPDSVG IRGSGAQDNQ GKWLKGYAYV DGTQFSSSID NHHDLHRYKI TLNSRDGQHM MLKVERSING GEWNTVISDF DVRTEGHFSQ APTNFRLSVT ASTGAATNFH EVDNFQVCAD KYSRLTDGIH HFEFDYSGSG STCQASDVTL RACMNESCSE QYPRDAYDDG SLTPLSVTLL PSVGNNVANW VGGTNVQFEN ETQLELQGSR AGDVTLGIDQ SSVPQFGFEG ARCRINGGPL SANNCNVTFA SNVLAVNVND VVASRETTGE DYLSFCSTRT EDGGESRGVN MSIDYEVAPV DSSQPVVISY KKKVKDQAVE WSSDVELTKA NKYLPNVYFD DEGKAFFKLR YAEAGKVKLK ASVEGVDDSD GFGSFVSFPS KLKVTAKSGD KSGECTNSEN GCSSGFVAAG EVFELTISAL QDDGSVAENY QEKTITVSNK VKYPSNGSLA KLLNERLPES SKWSGGNVKF DQSVSEVGVF ELIAEAPVAK DENGDDIGTS LYLGSKAFKI ADGKSTIGRF YPDYFKVTGT EWTYPDNQND SVYMGQNFAS VKFEVTAYNA DGYATQNYGS FADSLKADLY LAGSFSDRLS ILDSDLTSKN WSGAIWSKTW VNSVDWSKAA NLDGPFNSKV STDSSTESSI ALSLNKTAST KTAHIDPTLF LTEGNDGKQS RTVEQQLLSQ PDVRYGRMVL DDIGGRQGDT LSIPLKVEYW NKNRFVVNSE DNRTAVSAVE QGDDKLIWSS PDGVTACDIN IQVLDSADSE TSSAKVTGGI LPNANRERLT AVQGCDNEVR QQSQVWLDLD DSENGLPWLK YDWDNDGSEE NPSTVVTFGI HRGNDRVIYR GEPGLTGQ
|
| |