| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002355 |
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| Symbol | |
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| ID | 8556050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 818028 |
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| End bp | 821708 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405413 |
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| Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
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| Protein accession | YP_003284982 |
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| Protein GI | 262393128 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGAAGTA ACGTAAGACA ACAGATTGAA GCTCAATTGA AGCAACGTAT TCTTTTGATT
GATGGTGGTA TGGGAACCAT GATTCAGGGA TACAAACTTG AAGAGCAAGA CTATCGAGGA
ACGCGCTTTG CGGATTGGCA TTGTGATCTA AAAGGTAACA ACGACCTGTT GGTTCTAAGT
CAGCCTCAAC TTATCAAGGA AATTCACGCT GCATATTTAG GAGCGGGTGC AGATATTCTC
GAAACCAACA CGTTTAACGC AACAACCATT GCGATGGCTG ACTACGAGAT GGAAAGCCTA
AGTGAAGAAA TTAACTTTGC TGCTGCCAAG CTTGCACGTG AAGTTGCAGA CGAATGGACC
GCAAAAACAC CCGATAAACC GCGTTATGTC GCAGGGGTTT TAGGGCCGAC GAACCGCACT
TGTTCTATTT CTCCTGATGT AAATGACCCC GGATATCGAA ATGTTTCTTT CGACGAGTTA
GTTGAGGCTT ACTCTGAATC GACTCGAGCG CTGATTAAAG GTGGTTCTGA CCTTATTCTT
ATCGAGACCA TCTTCGATAC TCTTAACGCT AAGGCTTGTT CATTTGCTGT TGAAAGTGTG
TTTGAAGAGA TGGGTATTGA GTTACCTGTG ATGATCTCGG GGACTATTAC CGATGCTTCC
GGTCGGACAT TATCCGGTCA AACCACAGAA GCGTTTTACA ACTCATTACG TCATGTTAAA
CCGATTTCGT TTGGTTTGAA CTGTGCGCTG GGCCCAGATG AGCTTCGTCC TTATGTTGAA
GATCTCTCGC GTATATCAGA ATCTTTTGTT TCCGCTCACC CAAATGCTGG GCTTCCGAAT
GCATTCGGCG AATACGATTT GTCGCCAGAA GATATGGCTA AGCATGTTCA AGAGTGGGCT
CAAAGTGGCT TTTTAAACTT GATTGGTGGG TGTTGTGGCA CAACTCCAGA GCACATTCGC
CAAATGGCAC TCGCGGTTGA AAATGTCGCC CCTCGTCAAT TGCCTGACCT TCCCGTTGCT
TGTCGCTTGT CTGGCTTAGA GCCGCTCGCC ATTGATAAAG ACTCTTTATT CATCAATGTC
GGTGAGCGTA CGAATGTAAC TGGCTCTGCG CGTTTTAAGC GCTTGATTAA AGAAGAACTG
TACGATGAAG CGCTCGATGT GGCTCGTCAA CAAGTTGAAA ATGGCGCTCA AATTATCGAT
ATCAACATGG ACGAAGGCAT GTTGGATGCA CAAGCTTGTA TGGTTCGATT TTTAAATCTT
TGTGCGTCAG AACCTGAAAT CTCAAAAGTA CCAATCATGG TCGACTCTTC AAAGTGGGAG
GTTATTGAAG CCGGTCTTAA GTGCATCCAA GGCAAAGGCA TTGTTAACTC GATCTCTCTC
AAAGAAGGTA AAGAGAAATT CGTTGAACAA GCTAAGTTGA TCCGCCGTTA CGGTGCGGCT
GTGATTGTGA TGGCGTTTGA TGAGATAGGG CAAGCAGATA CACGTGAGCG CAAAGTGGAA
ATTTGTACCA ACGCTTACCG AATTCTCGTT GATGAAGTGG GCTTTCCACC AGAAGACATC
ATCTTTGACC CAAACATTTT TGCCATTGCT ACGGGTATCG AGGAGCATAA TAACTACGCG
GTGGATTTCA TTGAAGCCGT TGGCGATATC AAACGTGATT TACCACACGC GATGATCTCG
GGTGGTGTTT CTAACGTTTC CTTCTCATTC CGCGGTAATA ACTATGTGCG TGAAGCGATT
CACGCGGTGT TCCTCTACCA CTGCTTTAAG AATGGCATGG ATATGGGGAT TGTGAATGCG
GGTCAGTTAG AAATCTACGA TAACGTGCCT GAAACGCTGC GTGAGGCTGT GGAAGATGTC
GTTCTTAACC GTCGCGATGA TGCCACTGAG AGGTTGTTAG ATATCGCGGC GGAATACGCA
GGCAAAGGGG TAGGTAAAGA GGAGGATGCC TCTGCACTTG AGTGGAGAAC TTGGCCTGTT
GAAAAGCGTT TAGAACACGC GTTAGTGAAA GGAATAACCG AGTTTATCGT TGATGATACC
GAAGAGGCAC GTGTCAATGC TTCAAAGCCA TTAGAGGTGA TTGAAGGCCC ACTCATGGAT
GGGATGAACG TCGTCGGAGA CTTGTTTGGT GAAGGTAAAA TGTTCCTTCC TCAGGTCGTA
AAATCTGCCC GAGTGATGAA GCAAGCGGTA GCGCATCTCG AGCCCTACAT CAATGCAGAA
AAGCAGGTGG GACAAACAAA CGGTAAGATC TTGTTAGCGA CGGTAAAAGG TGATGTACAC
GATATCGGGA AAAATATCGT AGGCGTTGTA TTGCAGTGCA ATAACTATGA AATTATCGAT
CTTGGTGTCA TGGTTCCTTG CGAAAAGATC TTAAAAGTAG CGCAAGAAGA GAACGTCGAT
ATTATTGGTT TGTCAGGGTT GATCACGCCT TCATTAGACG AAATGGTGCA TGTTGCAAAA
GAGATGGAGC GTCTCGACTT TAACTTACCT CTTCTCATCG GTGGCGCAAC AACGTCAAAA
GCCCATACAG CAGTTAAGAT TGAGCAAAAT TACAAGCATC CAGTTGTTTA CGTGAATAAC
GCCTCACGTG CGGTGGGCGT ATGTACTTCT CTATTGTCAG ATGAACGTCG CCCTGAATTT
GTTGAAAAAC TTGAAGCTGA TTACGAACGA GTACGTGATC AACATAATCG AAAGAAACCG
AGAACCAAAC CAGTGACATT AGAAGCGGCT CGAGCGAATA AAGTTGCGAT CGATTGGGAA
GCTTACACTC CTCCAGTGCC TGTTAAGCCT GGTATTCATA TCTTCGATGA TTTTGATGTG
GCTATATTAC GTCAATACAT CGATTGGACA CCATTCTTTA TGACTTGGTC ACTTGTGGGT
AAGTATCCAA CAATTTTCCA ACATGAAGAA GTTGGTGAAG AAGCAAAACG TTTATTCGAA
GATGCCAACG AGTTACTTGA TCGAGTTGAG CGAGAAGGCC TGTTAAAAGC GCGTGGAATG
TGTGGCTTAT TCCCTGCTGC GAGCGTGGGG GACGACATTG AAGTTTATGC TGATGAAACT
CGTACCGACG TTGTGAAAGT ACTGCGTAAC TTGCGTCAAC AGACCGAGAA ACCAAAAGGA
TTCAACTATT GTTTATCTGA CTACATCGCA CCTAAAGAGT CGGGTAAACA TGATTGGATA
GGGGCATTTG CTGTCACTGG TGGTATTGGT GAACGAGAGC TTGCTGATGA ATACAAAGCA
CAGGGAGATG ATTACAACGC AATTATGATT CAAGCGGTGG CGGATCGCCT AGCCGAAGCG
TTTGCTGAGT ATTTGCATGA GCGTGTCCGT AAAGAAATTT GGGGTTATGC TGCGGATGAA
GATTTATCTA ACAATGATCT CATTCGTGAA AAATACCAAG GTATTCGCCC TGCGCCGGGT
TATCCAGCGT GCCCTGAGCA TACTGAAAAA GGACCGCTTT GGGAGCTACT TAATGTGGAA
GAGAATATTG GCATGACTCT AACCTCCAGC TATGCAATGT ATCCGGGCGC GTCAGTCTCT
GGTTGGTATT TCTCTCATCC TGACTCACGT TACTTTGCGA TCGCACAGAT CCAAGAAGAT
CAGCTAGAGA GCTACGCCGA TCGTAAGGGG TGGGATAGGA TCGAGGCTGA AAAATGGTTA
GGGCCAAACA TTAACGGTTA A
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| Protein sequence | MGSNVRQQIE AQLKQRILLI DGGMGTMIQG YKLEEQDYRG TRFADWHCDL KGNNDLLVLS
QPQLIKEIHA AYLGAGADIL ETNTFNATTI AMADYEMESL SEEINFAAAK LAREVADEWT
AKTPDKPRYV AGVLGPTNRT CSISPDVNDP GYRNVSFDEL VEAYSESTRA LIKGGSDLIL
IETIFDTLNA KACSFAVESV FEEMGIELPV MISGTITDAS GRTLSGQTTE AFYNSLRHVK
PISFGLNCAL GPDELRPYVE DLSRISESFV SAHPNAGLPN AFGEYDLSPE DMAKHVQEWA
QSGFLNLIGG CCGTTPEHIR QMALAVENVA PRQLPDLPVA CRLSGLEPLA IDKDSLFINV
GERTNVTGSA RFKRLIKEEL YDEALDVARQ QVENGAQIID INMDEGMLDA QACMVRFLNL
CASEPEISKV PIMVDSSKWE VIEAGLKCIQ GKGIVNSISL KEGKEKFVEQ AKLIRRYGAA
VIVMAFDEIG QADTRERKVE ICTNAYRILV DEVGFPPEDI IFDPNIFAIA TGIEEHNNYA
VDFIEAVGDI KRDLPHAMIS GGVSNVSFSF RGNNYVREAI HAVFLYHCFK NGMDMGIVNA
GQLEIYDNVP ETLREAVEDV VLNRRDDATE RLLDIAAEYA GKGVGKEEDA SALEWRTWPV
EKRLEHALVK GITEFIVDDT EEARVNASKP LEVIEGPLMD GMNVVGDLFG EGKMFLPQVV
KSARVMKQAV AHLEPYINAE KQVGQTNGKI LLATVKGDVH DIGKNIVGVV LQCNNYEIID
LGVMVPCEKI LKVAQEENVD IIGLSGLITP SLDEMVHVAK EMERLDFNLP LLIGGATTSK
AHTAVKIEQN YKHPVVYVNN ASRAVGVCTS LLSDERRPEF VEKLEADYER VRDQHNRKKP
RTKPVTLEAA RANKVAIDWE AYTPPVPVKP GIHIFDDFDV AILRQYIDWT PFFMTWSLVG
KYPTIFQHEE VGEEAKRLFE DANELLDRVE REGLLKARGM CGLFPAASVG DDIEVYADET
RTDVVKVLRN LRQQTEKPKG FNYCLSDYIA PKESGKHDWI GAFAVTGGIG ERELADEYKA
QGDDYNAIMI QAVADRLAEA FAEYLHERVR KEIWGYAADE DLSNNDLIRE KYQGIRPAPG
YPACPEHTEK GPLWELLNVE ENIGMTLTSS YAMYPGASVS GWYFSHPDSR YFAIAQIQED
QLESYADRKG WDRIEAEKWL GPNING
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