Gene VEA_002350 details

Gene Information

• Locus tag: VEA_002350
• ID: 8556035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 800097
• End bp: 801968
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 646405398
• Product: sulfite reductase [NADPH] flavoprotein alpha-component
• Protein accession: YP_003284977
• Protein GI: 262393123
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTC AAAAGAATGA GTATTCTCAC AAGAATGTGT CTGAAGATAA TAATGGGCAA 
GGAGGAAATC CTCCAATCGC AAGCCCTCTG AATGACCAAC AAATTAGCTC ACTCCAACAA 
ACTGTCTCTG AGTTGTCTTC ACAGCAACTT GCTTGGGTCA GTGGGTATTT TTGGGGATTA 
GCTCAAAATC AACCAAATAC AGCGGTAACG CCAATTGCAC AAGCGACGGC AGCCGTATCA 
GCGAAGCCTG CAGGTAAGTT GAGTATTATT TTTGCTTCCC AAACTGGCAA CGCTAAAGGC 
GTTGCTGAAG CTCTAGAACA GGAAGCAAAA GCAGAAGGAA TTGCTGTCGA ACTTTTTGAT 
GCAAGTGATT ACAAAGGTAA AAACTTAGCC AAAGAAACAC ATGTCATTAT TGTGGCATCG 
ACGAATGGCG AAGGCGAAGC ACCAGATAAC GCTATAGAGC TACACGAGTT TTTGCAATCT 
AAGAAAGCTC CTAAGCTGTC AAACCTTCAA TATGGCGTTA TTGCTCTGGG TGACTCGAGC 
TACGAATTCT TCTGCCAAAC CGGTAAAGAC TTCGACGCTT ACCTATCAAA GTTAGGCGCG 
ACCCCATTTA TCGATCGTCT TGATTGCGAT GTGGATTATG AAGCACCAGC AGCTGAATGG 
CGTAAGAATG CGTTAGGTAA GGTAAAAGAT ACGCTTTCTT CTGGCACTGA AGCGGATGTG 
GTTCAACTTC CTGTGGGTCA GGCGGCGACT GCGCACTCTC CTTACAATAA ACAAAACCCA 
TACACAGCGA TATTACTGAC CAGTCAAAAA ATCACGGGTC GTGATTCTGG AAAGGATGTT 
CGTCATATAG AAATTGACTT GGAAGGTTCG GGGTTAACGT ATCAGCCTGG TGATGCGCTA 
GGTGTGTGGT TTGAAAATAG TTCAGAACTT GCTAATGCCA TTCTTGGTAA GGTCGGTTTG 
TCTGGGGTTG AAACCGTTGA TGTTGATGGC GAAAGCTTGT CAATCCATAG TGCTCTCGTG 
AGTAAATATG AAATCACAAC ATCTAACCCT CAGCTCATTA CAAAGTTTGC CGAGTTATCC 
GGTAGCAAGA AGCTACAAAA GCTGGTTGAC GATAAAGATA AACTTCGCGA GTACTCTGCA 
AATACTCAAA TTGTTGATGT ATTGGCAGAG AAGAAAACCA AGTTAACCGC AGATGAGTTG 
ATTAGTTTGC TTCGTCGTCT TACTCCTCGC CTTTACTCTA TTGCATCAAG CCAAGAAGAG 
GTCGATGAAG AAGTACACCT AACGGTTGCT TTGGTTGAGT ACGAACAAAA CGACGAAAAA 
CGATATGGTG GTGCGTCGAG CTTCTTAGCA CAGCGTCTCG AAGAGGGAGA TGAAGTTAAA 
GTATTTGTTG AGCATAACAA CAACTTTAAA CTGCCGGAAG ATGATAGCAC TCCAATTATC 
ATGGTTGGTC CAGGCACAGG GATCGCACCA TTCCGTAGCT TTATTCAGGA ACGTGAAAAC 
CGCGATGCTG AAGGCAAAAA CTGGTTGTTC TTTGGTGATC GTACTTTCAC TCAAGACTTC 
TTATACCAAG TTGAATGGCA AAAGTACCTC AAGTCAGGAG TACTAAGCCG ATTGGATGTT 
GCTTTTAGTC GTGACCAAGT AGAAAAAGTT TACGTACAAC ATCGCATCTT AGAAAACGCC 
GCTCAAGTGT GGCAGTGGAT CCAAGAAGGC GCTTATATCT ATGTCTGCGG TGATGCCACT 
CGTATGGCAA AAGATGTGCA CAACGCACTG GTTATCGTTG CTGAACAAGA AGGCAAGATG 
CCGCGTGACG ATGCGGAACA ATTTATTAAT GACCTACGTA AAGCGAAACG TTATCAGAGG 
GATGTGTACT AA 

 

Protein sequence

MSFQKNEYSH KNVSEDNNGQ GGNPPIASPL NDQQISSLQQ TVSELSSQQL AWVSGYFWGL 
AQNQPNTAVT PIAQATAAVS AKPAGKLSII FASQTGNAKG VAEALEQEAK AEGIAVELFD 
ASDYKGKNLA KETHVIIVAS TNGEGEAPDN AIELHEFLQS KKAPKLSNLQ YGVIALGDSS 
YEFFCQTGKD FDAYLSKLGA TPFIDRLDCD VDYEAPAAEW RKNALGKVKD TLSSGTEADV 
VQLPVGQAAT AHSPYNKQNP YTAILLTSQK ITGRDSGKDV RHIEIDLEGS GLTYQPGDAL 
GVWFENSSEL ANAILGKVGL SGVETVDVDG ESLSIHSALV SKYEITTSNP QLITKFAELS 
GSKKLQKLVD DKDKLREYSA NTQIVDVLAE KKTKLTADEL ISLLRRLTPR LYSIASSQEE 
VDEEVHLTVA LVEYEQNDEK RYGGASSFLA QRLEEGDEVK VFVEHNNNFK LPEDDSTPII 
MVGPGTGIAP FRSFIQEREN RDAEGKNWLF FGDRTFTQDF LYQVEWQKYL KSGVLSRLDV 
AFSRDQVEKV YVQHRILENA AQVWQWIQEG AYIYVCGDAT RMAKDVHNAL VIVAEQEGKM 
PRDDAEQFIN DLRKAKRYQR DVY