| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002327 |
|---|
| Symbol | |
|---|
| ID | 8556012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 783662 |
|---|
| End bp | 784093 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405375 |
|---|
| Product | shikimate kinase I |
|---|
| Protein accession | YP_003284954 |
|---|
| Protein GI | 262393100 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000118825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTG TTGACTCCGA TACAGTGATC GAAGAACGCA CTGGTGCAGA CATCTCTTGG
GTTTTTGATG TAGAAGGTGA AGAAGGCTTC CGCAAGCGTG AAGAAGCGGT ACTTGAAGAC
CTAACACAAG AGCAAGGCAT CGTGCTTGCG ACTGGCGGTG GCTCTGTTAA GAGCAAAGAA
AACCGTAATC GTCTTTCGGC ACGTGGTGTT GTTGTTTACT TAGAAACGAC GATTGAAAAG
CAACTTGCGC GCACAAACCG TGACAAGAAG CGTCCTCTAC TTCAAACGGA CAACCCTCGC
GAAGTATTGG AGCAATTAGC TGAAGAACGT AATCCTCTGT ATGAAGAAGT AGCGGATTAC
ACTGTTCGCA CTGACGATCA GAGTGCAAAA GTGGTAGCCA ACCAGATCGT AAAAATGCTA
GAAGAGAGAT AA
|
|---|
| Protein sequence | MEFVDSDTVI EERTGADISW VFDVEGEEGF RKREEAVLED LTQEQGIVLA TGGGSVKSKE
NRNRLSARGV VVYLETTIEK QLARTNRDKK RPLLQTDNPR EVLEQLAEER NPLYEEVADY
TVRTDDQSAK VVANQIVKML EER
|
|---|
| |