| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002326 |
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| Symbol | |
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| ID | 8556011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 781639 |
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| End bp | 783387 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646405374 |
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| Product | type IV pilus biogenesis protein PilQ |
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| Protein accession | YP_003284953 |
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| Protein GI | 262393099 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000116776 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA GACAAGGATT AACACGTACA CCAAGGATAC TAACAGGGCT CTTCTCCTTA
TGGTTGTTTG TATTTTTAGC CCCTTTAGTG GCAGCAGAAG AAGTATCGTC TAATGCCTTA
AAGAGTATCG ACTTTCGCAC TAATAAAGAT AAAGACGCCG TTATAGTCGT TGAACTGGCG
TCACCTGCCG CGATTGTCGA TGTCAAACGC GTACAGGAAG GGTTAAGTAT CGATTTGCTT
AATACTTCGG TAAAAGACGA GCAACTGTAT CTCCTAGACG TAAAAGATTT CTCGACTGTG
GTTGAAAGCG TAGAGGTGTT TCGCGATACC TCAACTACTC GCTTGGTTGC GCACATTAAT
GAAGAATATA CGCATGATTA TCGTTTAACG GGGCGATTCT TGGAAATCAA AGTGGCTAAG
ATCAAACCCA ATGAGAAAGC CCCGGATAAA AGCATTCTAG AAAAAGAAGG CAAGCTCATT
TCAATTAACT TCCAAGATAT TCCTGTACGT AACGTGTTAC AGCTGATTGC TGACTACAAC
CAGTTCAACT TGGTTGTTTC AGACTCCGTA GAAGGTAACC TCACACTTCG TCTTGATGGT
GTTCCGTGGC AGCAAGTGCT GGATATTATT TTGCAAGTTA AGGGGTTAGA TAAGCGTGTT
GATGGCAACG TGATTCTGGT TGCTCCAACA GATGAGCTTG ATCTGCGCGA AAAACAGCAA
CTCGAAAAGC AGCAGCTAGA ACAAACGATG GGAGAGCTTT CGTCTGAAAT CATCAAGGTA
AACTTCGCTA AAGCATCAGA TATTGCAGAG ATGATCAACG GAGAAGGGAA CATCAGTATG
TTGTCTGAGC GAGGCAGTAT GACCATTGAT GAGCGGACTA ACTCGTTATT GATTCGTGAG
CTACCTGAAA ACATTGAAGT GATTCGAGAA ATTATTGAAT CTTTGGATAT CCCGGTGAAG
CAGGTTCAAA TTGAAGCGCG TATTGTGACC ATCAACGAAG GCAACATGGA TGAGTTGGGA
ATTCGCTGGG GCTTTACCTC TATTAATGGC AATAACACGG TTGGTGGCTC TATCGAAAAC
AACCTTGCCA CGATCGGTTT ATATAACGGA GGTGGTGAAG GAGAAGACGG TGGTGACGGC
GATGGAGTAG GTATCGATGA CTTCCTAAAC GTAAACTTAG CTGCAACCAG TCCAAACGCG
ACCAGCATTG CTTTTCAGGT TGCAAAATTA GGCTCAGACA CCTTGTTAGA CCTCGAGCTT
TCTGCGCTGC AACAAGAGTC CAAAGCTGAG ATTATCTCAA GTCCACGTTT GATCACTACC
AATAAGAAGC CTGCCTATAT TGAGCAAGGT ACCGAGATAC CTTATCTAGA GTCCTCATCA
AGTGGTGCAA CGACGGTAAC GTTCAAAAAA GCAGTATTGA GTTTGAAGGT GACGCCACAA
ATTACACCGG ATAACCGTCT TGTGTTGGAC TTAAGCGTTA CGCAAGATAG ACCTGGACAA
GTCGTGAAAA CAGGAACTGG TGAAGCCGTT GCGATTGATA CTCAACGTAT CGGGACGCAA
GTGTTAGTAA ATAACGGTGA AACCGTCGTT CTTGGTGGTA TTTTCCAGCA CAGCATTACT
AACTCGGTGG ACAAAGTGCC TTTGTTAGGC GATCTGCCAC TATTAGGTGC GCTTTTCCGT
CGAAGTTATG AAAATGTTGG CAAAAGTGAG CTGTTAATTT TCGTCACCCC TAAGGTGGTG
ATTCAGTAG
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| Protein sequence | MKMRQGLTRT PRILTGLFSL WLFVFLAPLV AAEEVSSNAL KSIDFRTNKD KDAVIVVELA
SPAAIVDVKR VQEGLSIDLL NTSVKDEQLY LLDVKDFSTV VESVEVFRDT STTRLVAHIN
EEYTHDYRLT GRFLEIKVAK IKPNEKAPDK SILEKEGKLI SINFQDIPVR NVLQLIADYN
QFNLVVSDSV EGNLTLRLDG VPWQQVLDII LQVKGLDKRV DGNVILVAPT DELDLREKQQ
LEKQQLEQTM GELSSEIIKV NFAKASDIAE MINGEGNISM LSERGSMTID ERTNSLLIRE
LPENIEVIRE IIESLDIPVK QVQIEARIVT INEGNMDELG IRWGFTSING NNTVGGSIEN
NLATIGLYNG GGEGEDGGDG DGVGIDDFLN VNLAATSPNA TSIAFQVAKL GSDTLLDLEL
SALQQESKAE IISSPRLITT NKKPAYIEQG TEIPYLESSS SGATTVTFKK AVLSLKVTPQ
ITPDNRLVLD LSVTQDRPGQ VVKTGTGEAV AIDTQRIGTQ VLVNNGETVV LGGIFQHSIT
NSVDKVPLLG DLPLLGALFR RSYENVGKSE LLIFVTPKVV IQ
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