| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002310 |
|---|
| Symbol | |
|---|
| ID | 8555995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 762417 |
|---|
| End bp | 765050 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405358 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_003284937 |
|---|
| Protein GI | 262393083 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA AATACGCCGC ACTCAAAAGT AATGTGCGCA TGTTAGGCCA CTTATTGGGT
AACACCATTC GCGATGCCCA TGGCGAAGAA ATCTTCGAGA AAGTGGAAAC CATTCGTAAA
TTATCCAAAT CAGCTCAAGC AGGAAATCAA GCAGACAGGG ACAGCTTGAT CGAAGAAATC
AAACATTTAC CTGATGAGCA ACTAACGCCC GTTACCCGTG CGTTTAACCA ATTTCTAAAT
CTCACCAATA TTGCTGAGCA ATACCACACG ATTTCACGCC ACTGTGAAGA ACACATCTGT
GAACCAGACG CGATTAACTC GCTGTTTTCT AAACTGGTAC AAAACGATGT GAGCAAACTG
GACACTGCGC AAGCGGTTCG TGATCTGAAT ATTGAATTGG TATTGACGGC TCACCCAACG
GAAATCACGC GTCGCACCAT GATCAACAAA TTGGTCAAGA TCAATGAGTG CTTATCAAAG
TTGGAACTGA GTGATCTTTC TTCTAAAGAG CGCAAGAAAA CCGAGCGTCG CTTAGAGCAA
CTTATCGCAC AAAGCTGGCA TTCTGACGTG ATTCGTCAAC AACGCCCTAC TCCATTGGAT
GAAGCGAAAT GGGGTTTTGC CGTAGTAGAA AACTCACTGT GGGAAGCAGT GCCAGACTTC
TTACGTGAAA TGCACGATCG CTTGAAATCT TACTTGGGTG AAGGTTTACC AATTGATGCT
CGCCCTGTGC ACTTCTCTTC TTGGATGGGG GGTGACCGCG ACGGTAACCC GTTCGTCACT
CATAGCGTGA CGCGTGAAGT ATTGCTTCTG TCTCGTTGGA AAGCTGCAGA TCTTTATCTC
AATGACATCA ACGAGTTGAT CAGTGAACTG TCTATGACGG TTTCAAACGA CCAAGTTCGT
GAGCTTGCTG GCGAAGATCA GCACGAACCA TATCGTGCGA TCCTGAAACA ACTTCGCACC
CTATTGAACG AAACCAAAGA TATTCTCGAT GCTAAAATCC ATGGTCAAAA ACTGGCCGTT
AAAGCTCCGT TGCAAAAAGT CGAGCAACTT TGGGAACCTC TGTATGCCTG TTACCAGTCG
CTAAATGAAT GTGGCATGGG TGTGATCGCA AATGGCTCTC TACTGGATAC ATTGCGCCGC
GTAAAAGCAT TTGGTATTCA TCTTGTTCGC CTTGATATCC GCCAAGAGAG CACGCGTCAT
TCAGACGTAT TGTCTGAATT AACCCGCTAC TTAGGCATTG GTGATTACGA ACAATGGAGC
GAGCAAGATA AGATTGCTTT CCTAACCAAC GAACTCGCAT CTAAACGTCC TCTTCTGCCT
CGTGATTGGG AACCATCAGA ACCTGTCAAA GAGGTTTTGG ACACCTGTAA GATTATTGCA
GCACAACCGC GTGAAGCATT CGGTGCCTAC GTTATTTCTA TGGCACGCAC TGCATCAGAT
GTGTTAGCAG TCCACCTACT TCTGCAAGAA GCAGGCTGCC CATATCGTAT GGATGTTTGC
CCGTTATTCG AGACGCTAGA CGACTTGAAC AATGCAGAAT CGGTCATCAA ACAGCTGATG
GGTATCGACC TATACCGTGG CTTTATCCAA AACCACCAAA TGGTCATGAT TGGTTACTCT
GACTCAGCGA AAGATGCGGG TGTCATGTCT GCAGGCTGGG CTCAGTACCA TGCGATGGAA
TCGTTAGTAA AAGTGGCGGA AGAAGAAGGT GTTGAACTGA CTCTATTCCA CGGTCGTGGC
GGTACAGTAG GCCGCGGTGG CGCGCCAGCA CACGCTGCAC TTCTGTCTCA ACCACCAAAA
AGCTTGAAAG GTGGTTTGCG CGTAACAGAA CAGGGCGAGA TGATCCGCTT TAAACTGGGC
CTTCCAGATG TCGCCGTAAA CAGTTTTAAC CTTTACGCGA GCGCGATTCT AGAAGCCAAC
CTATTGCCAC CACCAGAGCC AAAACAAGAA TGGCGCGACT TAATGGAAGT GCTATCAGAA
GTTAGCTGCG AGTCTTATCG CAACGTAGTT CGCGGTGAGC CTGACTTTGT GCCTTACTTC
CGTCAAGCGA CACCAGAGCT CGAGCTCGGT AAGTTGCCAC TTGGCTCTCG TCCTGCAAAA
CGTAATCCGA AGGGCGGAGT GGAAAGCTTA CGTGCAATCC CGTGGATCTT CTCGTGGAGC
CAAAATCGTT TGGTACTTCC AGCATGGTTA GGTGCGGGTG AAGCGATTCA ATACTCGATC
GATAAAGGTC ACCAAGCGCT GCTCGAAGAG ATGTGTCGTG AATGGCCGTT CTTCTCGACT
CGCCTTGGCA TGTTAGAAAT GGTGTACTCG AAGTGTAATA TCGATATTTC TCGCTATTAC
GATGAGCGAT TGGTGGATGA ATCACTCCGT CCACTCGGTG AAAAGCTTCG CGCTCAGCTT
CAAGAAGATA TCAAAGCAGT ACTGAATGTA GAGAACAACG AAAACTTGAT GCAGCATGAC
CCTTGGGGAC TCGAATCGAT TCGCTTGCGC AACATCTACG TTGAGCCATT GAACATGCTA
CAAGCCGAGT TGCTATACCG TACACGCCAA ACCGAAGAAG CATCTGCAAA CCTAGAAGAA
GCGCTAATGG TGACAATTGC TGGTATTGCA GCTGGCATGC GCAACACAGG CTAA
|
|---|
| Protein sequence | MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ ADRDSLIEEI
KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC EPDAINSLFS KLVQNDVSKL
DTAQAVRDLN IELVLTAHPT EITRRTMINK LVKINECLSK LELSDLSSKE RKKTERRLEQ
LIAQSWHSDV IRQQRPTPLD EAKWGFAVVE NSLWEAVPDF LREMHDRLKS YLGEGLPIDA
RPVHFSSWMG GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR
ELAGEDQHEP YRAILKQLRT LLNETKDILD AKIHGQKLAV KAPLQKVEQL WEPLYACYQS
LNECGMGVIA NGSLLDTLRR VKAFGIHLVR LDIRQESTRH SDVLSELTRY LGIGDYEQWS
EQDKIAFLTN ELASKRPLLP RDWEPSEPVK EVLDTCKIIA AQPREAFGAY VISMARTASD
VLAVHLLLQE AGCPYRMDVC PLFETLDDLN NAESVIKQLM GIDLYRGFIQ NHQMVMIGYS
DSAKDAGVMS AGWAQYHAME SLVKVAEEEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE WRDLMEVLSE
VSCESYRNVV RGEPDFVPYF RQATPELELG KLPLGSRPAK RNPKGGVESL RAIPWIFSWS
QNRLVLPAWL GAGEAIQYSI DKGHQALLEE MCREWPFFST RLGMLEMVYS KCNIDISRYY
DERLVDESLR PLGEKLRAQL QEDIKAVLNV ENNENLMQHD PWGLESIRLR NIYVEPLNML
QAELLYRTRQ TEEASANLEE ALMVTIAGIA AGMRNTG
|
|---|
| |