| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002303 |
|---|
| Symbol | |
|---|
| ID | 8555988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 754692 |
|---|
| End bp | 755969 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405351 |
|---|
| Product | NADP-dependent malic enzyme |
|---|
| Protein accession | YP_003284930 |
|---|
| Protein GI | 262393076 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.751894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG ACAATCGCCA AGCAGCCACT CCAGAAGAAG AACATCGCCA AAAAGCATTG
GATTACCATG CTTATCCAAC CCCAGGGAAG ATTGCTGTCG AATTGACAAA GCCTGCGGAA
ACGGCGGGTG ATCTTGCCCT TGCTTACAGC CCTGGTGTTG CAGAACCAGT GCGTGAGATC
GCACAAAACC CTGATAACGT GTACAAGTAC ACAGCGAAAG GCAACATGGT TGCTGTTATT
TCTAACGGTA CCGCTATTTT AGGTCTAGGT AACCTAGGTC CACTTGCATC TAAGCCAGTA
ATGGAAGGTA AAGCGTTACT GTTTAAGCGT TTTGCTGGCC TTGACTCGAT TGATATTGAA
GTTAAGCACC GCACGATCGA TGAATTTGTT GATACTGTCG CAAGCATTGC AGACACCTTT
GGTGGTATCA ACCTTGAAGA TATTAAAGCA CCAGATTGCT TTGAGATTGA AAAGCGTTTA
ATTGAGCGTT GTGATGTACC AGTATTCCAC GATGATCAGC ACGGTACTGC GATTGTAACG
GCGGCAGGCA TGCTGAACGC GATCGAACTT CAAGGTAAGA AGCTTGAAGA CTCAACGATC
GTTTGTCTTG GCGCTGGCGC TGCAGCTGTT GCGTGTATGG AGCTGCTGAT TAAATGTGGT
GCAATGCGCG AAAAAATTTA CATGCTGGAT CGTAAAGGTG TGATCCACAC TCGTCGTGAT
GATCTTAATG AATACAAGCA GCTATTCGCA AACAACACGG ACAAACGCAC ATTAGAAGAT
GTGATTGAAG GCGCGGATCT GTTCCTAGGT GTATCTGGTC CAAACCTATT GCCAGCGGAA
GCGTTGAAGC TGATGGCAGA TAAGCCAATC GTATTTGCAT GTTCGAATCC AGATCCTGAA
ATTAAGCCTG AACTTGCCCA CGCTGTTCGT GATGATTTGA TCATGGGTAC TGGCCGTAGT
GATTACCCGA ACCAAGTAAA CAACGTATTA TGTTTCCCAT TCATCTTCCG TGGTGCTCTT
GATGTGCGCG CAAGTGAAAT CAATGATGAA ATGAAACTTG CAGCCGTTGA GGCGATTCGT
GAGCTAGCAA AAGAGCCTGT ACCTGAAACT GTATTGAAGG CCGCAGGCGT CGATAAGCTT
GAGTTTGGTG CAGACTACAT CATTCCAAAA CCAATGGACT CACGTTTACT ACCACGTGTT
GCAAAAGCTG TGGCTCAGGC GGCAGTTGAT TCAGGTGTTG CTCGTATCGA GATGCCTGAA
AACTACATGG CAGAGTAA
|
|---|
| Protein sequence | MSEDNRQAAT PEEEHRQKAL DYHAYPTPGK IAVELTKPAE TAGDLALAYS PGVAEPVREI
AQNPDNVYKY TAKGNMVAVI SNGTAILGLG NLGPLASKPV MEGKALLFKR FAGLDSIDIE
VKHRTIDEFV DTVASIADTF GGINLEDIKA PDCFEIEKRL IERCDVPVFH DDQHGTAIVT
AAGMLNAIEL QGKKLEDSTI VCLGAGAAAV ACMELLIKCG AMREKIYMLD RKGVIHTRRD
DLNEYKQLFA NNTDKRTLED VIEGADLFLG VSGPNLLPAE ALKLMADKPI VFACSNPDPE
IKPELAHAVR DDLIMGTGRS DYPNQVNNVL CFPFIFRGAL DVRASEINDE MKLAAVEAIR
ELAKEPVPET VLKAAGVDKL EFGADYIIPK PMDSRLLPRV AKAVAQAAVD SGVARIEMPE
NYMAE
|
|---|
| |