| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002294 |
|---|
| Symbol | |
|---|
| ID | 8555979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 747722 |
|---|
| End bp | 748117 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646405342 |
|---|
| Product | tRNA 5-methylaminomethyl-2-thiouridine synthase TusD |
|---|
| Protein accession | YP_003284921 |
|---|
| Protein GI | 262393067 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
|---|
| TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000990562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAGC TGACTTACAC GTTGGTGGTG AACGGTCCTG TTTACGGTAG CCAGTCAGCA
CGCAGTGCTT ATCAGTTCGC CAAGGCGGTG ATTGAGCAAG GCCATCAGTT AGTGAGCGTT
TTCTTTTATC AAGAGGGCGT GACCAATGGT ACTGCTTTGA GTGTGCCTGC CAACGACGAA
TTTGATCTCA ATAAGGCATG GCAATCTTTG GCAAAAGAGC ATGGTGTTCG TCTAGAAACT
TGTGTTGCTG CGGCTTTGCG TCGCGGGATC GTAAGTGAAG AAGAAGCGAA TCAACATGGT
TTGGTCCAGA GCAATCTAGC GGAAAGTTTT GAGCAAGCCG GCTTAGGTAG CTTAGCCGAA
GCGATGTTAA CCCAAGACAG AGTGGTACAG TTTTGA
|
|---|
| Protein sequence | MSKLTYTLVV NGPVYGSQSA RSAYQFAKAV IEQGHQLVSV FFYQEGVTNG TALSVPANDE
FDLNKAWQSL AKEHGVRLET CVAAALRRGI VSEEEANQHG LVQSNLAESF EQAGLGSLAE
AMLTQDRVVQ F
|
|---|
| |