| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002291 |
|---|
| Symbol | |
|---|
| ID | 8555976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 744962 |
|---|
| End bp | 745948 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405339 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003284918 |
|---|
| Protein GI | 262393064 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000281233 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA TTTCTCATTT ATTCCTATAT TTAATTGTCA TCACCACGTT AAATGGTTGC
TTTTTCGCCG AGCGTGAAGT GCAGCGTTGG CCGATAGAGC CTCAGGGTGC GACGAGCTTC
GCACTTAGCA GAGATGGACG ATTTGCTCTG CTCTATTCTC AGCAACACCA TTTGATGTTG
TGGGACCTAG AGCAAAATGA ACAACTAGCC AACCTGGGTG AGCTCGATGC CGATGCCAAC
GTGGTATCCC ATATTCGTAT CTCAGACAAT GGTCGCTATG CAGTCACAGC GAGCCAAATG
AACTTCGCAG TTTGGGACTT AGGCTGGACG CAATCCAAAG GCCTTTGGTC TATTTCTGAT
GCGCTCATTC GCGACGTTGA TATCACCAGT AACGGTGAAC AAGTTCTGCT CGGGTTATCC
AACGGTAAAG CAATTTACGT CAACTTAGTC ACCGGACGTC GCTTGGAGTT CCTTGCGCAT
CGTGAAAAAG TCAATTCCGT CGCCATTTCT CCTAATGGCC GCTTCGCACT GACTGGTGGT
AATGACTACA AAGCGTATTT GTGGGACACC GAAACCGGAC AAGTGCTGCG GACCTTCGAA
CATGAACAAC GGGTTGTTCG TGTTGCCCTG CAACGAGATG GCAAGTTAGC AATGACATCC
GATGGCGGAA ACCAAGCGGT AATTTGGGAT TTAAAAACTG GACAAGAAGT CACACAGTTG
AGCAGTTGGT CGCGCCAATT GATCTTCTCC ACTGCGCGAT TTTCTGATGA CGGAACTCAG
TTAGTGACAG GAACGCCTTC TGGCCGCGTT TCAATATGGG ATACTCAAAC CGGAAAACGG
ATTGGCGGAT TTGAAGTTGA GCCAAAAAAA GACACTCGCC CTCCCCGTGC GGTCGTGTAT
GATGCAGCCT TTGATTCAAA ACAACGCGTA ATTACTGCTA CTTCAGCAGG TATTGCCCAA
GCTTGGCAGT TAGAGAACGG ATCATGA
|
|---|
| Protein sequence | MQRISHLFLY LIVITTLNGC FFAEREVQRW PIEPQGATSF ALSRDGRFAL LYSQQHHLML
WDLEQNEQLA NLGELDADAN VVSHIRISDN GRYAVTASQM NFAVWDLGWT QSKGLWSISD
ALIRDVDITS NGEQVLLGLS NGKAIYVNLV TGRRLEFLAH REKVNSVAIS PNGRFALTGG
NDYKAYLWDT ETGQVLRTFE HEQRVVRVAL QRDGKLAMTS DGGNQAVIWD LKTGQEVTQL
SSWSRQLIFS TARFSDDGTQ LVTGTPSGRV SIWDTQTGKR IGGFEVEPKK DTRPPRAVVY
DAAFDSKQRV ITATSAGIAQ AWQLENGS
|
|---|
| |