Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002262 |
Symbol | |
ID | 8555947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 713680 |
End bp | 714660 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405311 |
Product | HflC protein |
Protein accession | YP_003284890 |
Protein GI | 262393036 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00114995 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAGT TAATGATCCC TGTATTGGTA ATCGCACTGG CATTAATGTT GATGTCTCTG TTTGTGATTC CTGAAGGTGA GCGCGGTATC GTGGTTCGAT TTGGTCGTGT TCTTAAAGAC AACAACGACA TCACTCGAAT TTACGAGCCT GGTTTGCATT TCAAGATGCC TCTGTTTGAC CGTGTGAAAC AACTTGATGC ACGTATCCAA ACGATGGATG GCCGTGCAGA CCGTTTCGTA ACGTCTGAGA AAAAAGACGT TATTATTGAT ACCTACGTGA AGTGGCGTAT TGAAGACTTT GGTCGTTACT ACCTAGCGAC AGGCGGTGGT AATTCGCTAA CGGCGGAGGC ACTACTTGAG CGTAAAGTAA CGGATGTGCT TCGTTCTGAA ATCGGTGCTC GTGAAATCAA ACAGATTGTA TCTGGTCCAC GTAACGATGA TGTACTACCA GAAGATGCAA GTGCAGATGT TGTCGCAACT GAAGCGGCAC GTGAAGCGCT TGAGATTGAT GGTGAACGTG ACCTAATTAT GTCTGAAGTG TTGAAAGACA CGCGTGAAAG CGCGATGAAA GACTTGGGTG TTCGTGTTGT TGATTTCCGC ATGAAGAAAA TCAACCTGCC TGATGAAATC AGTGAGTCTA TCTACCGTCG TATGCGTGCA GAGCGTGAGT CTGTAGCTCG TAAGCACCGT TCTCAAGGTC GTGAGAAAGC GGAAGTTATT CGTGCTCAAG CTGAGCTAGA AGTGGCAACC ATTCTAGCTG AAGCTGATAA GACTGCTCGT GTAACACGAG GTGAAGCGGA TGCAGAAGCA GCGAAGATTT ATGCTGAAGC ATACAACAAA GACCCTGAAT TCTTTAGCTT CCTACGTTCG CTACGTGCGT ATGAGAAGTC CTTCAGCTCT AAGAGCGATA TCCTGGTACT TGATCCGAAG AGTGAGTTCT TCCAATACAT GAACCAGTCG AAGGGCGGCA TGGAGAAATA A
|
Protein sequence | MRKLMIPVLV IALALMLMSL FVIPEGERGI VVRFGRVLKD NNDITRIYEP GLHFKMPLFD RVKQLDARIQ TMDGRADRFV TSEKKDVIID TYVKWRIEDF GRYYLATGGG NSLTAEALLE RKVTDVLRSE IGAREIKQIV SGPRNDDVLP EDASADVVAT EAAREALEID GERDLIMSEV LKDTRESAMK DLGVRVVDFR MKKINLPDEI SESIYRRMRA ERESVARKHR SQGREKAEVI RAQAELEVAT ILAEADKTAR VTRGEADAEA AKIYAEAYNK DPEFFSFLRS LRAYEKSFSS KSDILVLDPK SEFFQYMNQS KGGMEK
|
| |