| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002262 |
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| Symbol | |
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| ID | 8555947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 713680 |
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| End bp | 714660 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405311 |
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| Product | HflC protein |
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| Protein accession | YP_003284890 |
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| Protein GI | 262393036 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00114995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGT TAATGATCCC TGTATTGGTA ATCGCACTGG CATTAATGTT GATGTCTCTG
TTTGTGATTC CTGAAGGTGA GCGCGGTATC GTGGTTCGAT TTGGTCGTGT TCTTAAAGAC
AACAACGACA TCACTCGAAT TTACGAGCCT GGTTTGCATT TCAAGATGCC TCTGTTTGAC
CGTGTGAAAC AACTTGATGC ACGTATCCAA ACGATGGATG GCCGTGCAGA CCGTTTCGTA
ACGTCTGAGA AAAAAGACGT TATTATTGAT ACCTACGTGA AGTGGCGTAT TGAAGACTTT
GGTCGTTACT ACCTAGCGAC AGGCGGTGGT AATTCGCTAA CGGCGGAGGC ACTACTTGAG
CGTAAAGTAA CGGATGTGCT TCGTTCTGAA ATCGGTGCTC GTGAAATCAA ACAGATTGTA
TCTGGTCCAC GTAACGATGA TGTACTACCA GAAGATGCAA GTGCAGATGT TGTCGCAACT
GAAGCGGCAC GTGAAGCGCT TGAGATTGAT GGTGAACGTG ACCTAATTAT GTCTGAAGTG
TTGAAAGACA CGCGTGAAAG CGCGATGAAA GACTTGGGTG TTCGTGTTGT TGATTTCCGC
ATGAAGAAAA TCAACCTGCC TGATGAAATC AGTGAGTCTA TCTACCGTCG TATGCGTGCA
GAGCGTGAGT CTGTAGCTCG TAAGCACCGT TCTCAAGGTC GTGAGAAAGC GGAAGTTATT
CGTGCTCAAG CTGAGCTAGA AGTGGCAACC ATTCTAGCTG AAGCTGATAA GACTGCTCGT
GTAACACGAG GTGAAGCGGA TGCAGAAGCA GCGAAGATTT ATGCTGAAGC ATACAACAAA
GACCCTGAAT TCTTTAGCTT CCTACGTTCG CTACGTGCGT ATGAGAAGTC CTTCAGCTCT
AAGAGCGATA TCCTGGTACT TGATCCGAAG AGTGAGTTCT TCCAATACAT GAACCAGTCG
AAGGGCGGCA TGGAGAAATA A
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| Protein sequence | MRKLMIPVLV IALALMLMSL FVIPEGERGI VVRFGRVLKD NNDITRIYEP GLHFKMPLFD
RVKQLDARIQ TMDGRADRFV TSEKKDVIID TYVKWRIEDF GRYYLATGGG NSLTAEALLE
RKVTDVLRSE IGAREIKQIV SGPRNDDVLP EDASADVVAT EAAREALEID GERDLIMSEV
LKDTRESAMK DLGVRVVDFR MKKINLPDEI SESIYRRMRA ERESVARKHR SQGREKAEVI
RAQAELEVAT ILAEADKTAR VTRGEADAEA AKIYAEAYNK DPEFFSFLRS LRAYEKSFSS
KSDILVLDPK SEFFQYMNQS KGGMEK
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