Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002261 |
Symbol | |
ID | 8555946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 712472 |
End bp | 713677 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405310 |
Product | HflK protein |
Protein accession | YP_003284889 |
Protein GI | 262393035 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0330443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTGGA ATGAGCCTGG AAATAACAAC GGCAACAATG GCCGCGATAA TGACCCTTGG GGTAATAATA ATCGTGGTGG CCAGCGTCCT GGTGGCCGAG ATCAAGGTCC GCCAGATTTA GATGAAGTGT TCAATAAACT GAGTCAAAAA CTGGGTGGCA AGTTTGGTAA AAAAGGCGGC GGTGGTTCTC CAATCGGCGG TGGTGGTGGT AGTGCAATTG GCTTTGGCGT GATTGCTCTT ATTGCTGTTG CAGTTTGGTT CTTCGCTGGT TTTTACACCA TCGGTGAAGC AGAGCGTGGT GTTGTGCTGC GTTTAGGTAA ATACGATCGT ATCGTAGACC CAGGCCTTAA CTGGCGCCCT CGTTTTATTG ATGAATACGA AGCGGTAAAC GTACAAGCGA TTCGTTCACT ACGTGCATCT GGTCTAATGC TGACTAAAGA TGAAAACGTC GTAACAGTCG CGATGGATGT TCAGTACCGA GTGACTGACC CGTACAAATA CTTGTACCGT GTAACCAATG CGGACGATAG CTTGCGTCAA GCAACGGATT CTGCACTACG TGCAGTAATT GGTGATTCAT TGATGGATAG CATTCTAACC AGTGGTCGTC AGCAAATTCG TCAAACTACG CAAGAAACAC TGAACCAAAT CATTGATAGC TATGATATGG GTCTGGTACT TGTTGACGTA AACTTCCAGT CTGCGCGTCC ACCAGAGCAA GTGAAAGATG CGTTTGATGA TGCAATCGCA GCTCGTGAGG ATGAAGAGCG TTTCATCCGT GAAGCTGAAG CATACAAGAA CGAAATTTTG CCGAAGGCAA CGGGTCGTGC TGAACGTTTG AAGAAAGAAG CACAAGGTTA CAATGAGCGT GTCACTAACG AGGCTCTTGG TCAGGTAGCA CAGTTCGAAA AACTACTACC AGAATACCAA GCGGCACCAG GTGTAACGCG TGACCGTCTG TACATTGACG CAATGGAAGA AGTGTACTCA AGCACTTCGA AAGTGTTGAT TGACTCTGAA TCAAGCGGCA ATCTTCTGTA CCTTCCAATC GATAAGTTGG CGGGCCAAGA AGGTCAGGCA GACACAAAAC GTAAATCGAA GTCATCTTCA ACCTACGATC AAATTCAACT GGAGTCTGAG CGTACACAAG AAGACACTTC GAACACGCAG TCTCGTTCAA CAGGTTCACG TCAAGGGAGA TACTAA
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Protein sequence | MAWNEPGNNN GNNGRDNDPW GNNNRGGQRP GGRDQGPPDL DEVFNKLSQK LGGKFGKKGG GGSPIGGGGG SAIGFGVIAL IAVAVWFFAG FYTIGEAERG VVLRLGKYDR IVDPGLNWRP RFIDEYEAVN VQAIRSLRAS GLMLTKDENV VTVAMDVQYR VTDPYKYLYR VTNADDSLRQ ATDSALRAVI GDSLMDSILT SGRQQIRQTT QETLNQIIDS YDMGLVLVDV NFQSARPPEQ VKDAFDDAIA AREDEERFIR EAEAYKNEIL PKATGRAERL KKEAQGYNER VTNEALGQVA QFEKLLPEYQ AAPGVTRDRL YIDAMEEVYS STSKVLIDSE SSGNLLYLPI DKLAGQEGQA DTKRKSKSSS TYDQIQLESE RTQEDTSNTQ SRSTGSRQGR Y
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