Gene VEA_002261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002261 
Symbol 
ID8555946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp712472 
End bp713677 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content47% 
IMG OID646405310 
ProductHflK protein 
Protein accessionYP_003284889 
Protein GI262393035 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0330443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGA ATGAGCCTGG AAATAACAAC GGCAACAATG GCCGCGATAA TGACCCTTGG 
GGTAATAATA ATCGTGGTGG CCAGCGTCCT GGTGGCCGAG ATCAAGGTCC GCCAGATTTA
GATGAAGTGT TCAATAAACT GAGTCAAAAA CTGGGTGGCA AGTTTGGTAA AAAAGGCGGC
GGTGGTTCTC CAATCGGCGG TGGTGGTGGT AGTGCAATTG GCTTTGGCGT GATTGCTCTT
ATTGCTGTTG CAGTTTGGTT CTTCGCTGGT TTTTACACCA TCGGTGAAGC AGAGCGTGGT
GTTGTGCTGC GTTTAGGTAA ATACGATCGT ATCGTAGACC CAGGCCTTAA CTGGCGCCCT
CGTTTTATTG ATGAATACGA AGCGGTAAAC GTACAAGCGA TTCGTTCACT ACGTGCATCT
GGTCTAATGC TGACTAAAGA TGAAAACGTC GTAACAGTCG CGATGGATGT TCAGTACCGA
GTGACTGACC CGTACAAATA CTTGTACCGT GTAACCAATG CGGACGATAG CTTGCGTCAA
GCAACGGATT CTGCACTACG TGCAGTAATT GGTGATTCAT TGATGGATAG CATTCTAACC
AGTGGTCGTC AGCAAATTCG TCAAACTACG CAAGAAACAC TGAACCAAAT CATTGATAGC
TATGATATGG GTCTGGTACT TGTTGACGTA AACTTCCAGT CTGCGCGTCC ACCAGAGCAA
GTGAAAGATG CGTTTGATGA TGCAATCGCA GCTCGTGAGG ATGAAGAGCG TTTCATCCGT
GAAGCTGAAG CATACAAGAA CGAAATTTTG CCGAAGGCAA CGGGTCGTGC TGAACGTTTG
AAGAAAGAAG CACAAGGTTA CAATGAGCGT GTCACTAACG AGGCTCTTGG TCAGGTAGCA
CAGTTCGAAA AACTACTACC AGAATACCAA GCGGCACCAG GTGTAACGCG TGACCGTCTG
TACATTGACG CAATGGAAGA AGTGTACTCA AGCACTTCGA AAGTGTTGAT TGACTCTGAA
TCAAGCGGCA ATCTTCTGTA CCTTCCAATC GATAAGTTGG CGGGCCAAGA AGGTCAGGCA
GACACAAAAC GTAAATCGAA GTCATCTTCA ACCTACGATC AAATTCAACT GGAGTCTGAG
CGTACACAAG AAGACACTTC GAACACGCAG TCTCGTTCAA CAGGTTCACG TCAAGGGAGA
TACTAA
 
Protein sequence
MAWNEPGNNN GNNGRDNDPW GNNNRGGQRP GGRDQGPPDL DEVFNKLSQK LGGKFGKKGG 
GGSPIGGGGG SAIGFGVIAL IAVAVWFFAG FYTIGEAERG VVLRLGKYDR IVDPGLNWRP
RFIDEYEAVN VQAIRSLRAS GLMLTKDENV VTVAMDVQYR VTDPYKYLYR VTNADDSLRQ
ATDSALRAVI GDSLMDSILT SGRQQIRQTT QETLNQIIDS YDMGLVLVDV NFQSARPPEQ
VKDAFDDAIA AREDEERFIR EAEAYKNEIL PKATGRAERL KKEAQGYNER VTNEALGQVA
QFEKLLPEYQ AAPGVTRDRL YIDAMEEVYS STSKVLIDSE SSGNLLYLPI DKLAGQEGQA
DTKRKSKSSS TYDQIQLESE RTQEDTSNTQ SRSTGSRQGR Y