| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002259 |
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| Symbol | |
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| ID | 8555944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 710835 |
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| End bp | 711098 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405308 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_003284887 |
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| Protein GI | 262393033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.912109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTCT ACAAGACCCA TTTCTAAACG CGCTACGTCG TGAGCGTATC
CCGGTATCTA TCTACCTTGT GAATGGTATT AAACTACAAG GTCAGATCGA ATCGTTCGAT
CAATTTGTGA TCCTGCTGAA GAATACTGTT AACCAAATGG TGTACAAGCA CGCGATCTCA
ACAGTTGTGC CGGCTCGTCC AGTGAGCCAT CACAGCGGTG AACGTCCACA AGGTGAGCGT
CCACAAGAGA AATCAGAAGA TTAA
|
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| Protein sequence | MAKGQSLQDP FLNALRRERI PVSIYLVNGI KLQGQIESFD QFVILLKNTV NQMVYKHAIS
TVVPARPVSH HSGERPQGER PQEKSED
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