Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002256 |
Symbol | |
ID | 8555941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 705966 |
End bp | 707681 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405305 |
Product | N-acetylmuramoyl-L-alanine amidase AmiB precursor |
Protein accession | YP_003284884 |
Protein GI | 262393030 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000111797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGTT TTTCAAATTT TAGAGTAGTG GCGACGTTTG TCGCCACTTT TCTCCTTCTC ATCCCCAATT TAGCATTTGC TAACGTCGTT AAGAGTTTTC GAGTTTGGCC TTCTCCTGAT GAAACGCGTG TTGTCATCGA TTTAGGCTCG GAAGCTGACT ATTCCTATTT CTCTTTATCC GGACCGGATC GTCTTGTCGT GGATTTAAAA AGCACGACCA TGCAGGCCAA ACTGCCTGTT ACTGTTACGG ACAGCCCGGT TTTAAAGCTA GTTCGAAAAA GCTCTCCGCC AGAGAAGGGC ACCTATCGTT TGGTGTTTGA ACTGAAAAAG AGCGTTCAAG CAGAATTGTT TAAATTAAGC CCAACACCTG GCGGGCAATA TGGTCACCGT TTGGTGATTG ACCTGCCGCA CGGTAAGAAA GCATCGACTT CAGCTTCTAA ACCGAGCAAG CCAGCGGCGA CCAGTAAAGA CATGAGTTCA GTACAAAGAG CTCAAGAAGT CTTGATCGTT ATCGACCCTG GTCACGGTGG TGAAGATCCT GGCTCTATTG GCCCTTCACG CCGTAAGTAC GAGAAAGACG CGGTATTGAG TATCTCAAGA AAAATTGCTG CTCAGCTCGA TGCTACGCCT GGGATTAAAA CGCGTATGAC ACGTACCGGA GATTACTTTG TGAATCTAAA CCGTCGTGTA GCCATTGCCC GTGAAAATGA TGCGCACTTA CTGATTTCCA TTCACGCTGA TGCGTTTACC TCACCGAAGC CTCGCGGAGG TTCGGTTTTC GTACTGAATA CTCGTCGTGC AAATACTGAA ATTGCTCGCT GGGTTGAGAA CCATGAGAAA CAATCTGAAA TATTAGGTGG TTCGGGTAAT GCGTTCTTCA CTAAGACCAA AGATCGTAAC GTGAACCAAA CTTTGTTGGA CTTGCAGTTT AGTCATTCAC AAAAAGAAGG GTATAAACTG GCAACAGAAA TCCTTGGTGA GATGGGGCGT GTTGCGCACC TGCATAACAC CAAACCGATT AATACTAGCC TTGCTGTTTT ACGCTCTCCT CAGATTCCGT CTGTATTAGT GGAAACGGGC TTTATTTCTA ACCCAACAGA AGAGCGGTTG CTGTTTCAAC GAGCGCACCA AGATAAGTTA GCTCAGGCGA TTACCAAGGC GGTCGTTAAG TACTTAAAAG ATAATCCACC AGAGGGTACG GTATTCTCGC CTTCAGCGAA GCCAATAGTG CATACCGTAA AACGTGGCGA GTCGTTATCG GTGATTGCGA ATAAATATGG GCTTAGCTCT AAAGCGCTGA TGTCGGCAAA CAACTTGAAG TCGACTGGAT TAGCAATTGG TCAGAAGCTC AAAATCCCTT CTGCTGGCAC GATTAAAGTA CCAAGTAAAC CGATTACTGT TGAGACAGAA ACCATCATTC ATAAGGTTAA GTCAGGTGAG TTCTTAGGTA AGATTGCGAG TCACTATAAA GTGAAGGTTT CAGATATCCG CCGTGAGAAC AACTTGAAGT CAGATACCTT GTGGGTAGGA CAAAAGTTGA AGATAACCGT TGCTGTCAAA GACAAGCCGA TCCGTAAGCA CAAAGTTTCT CGAGGTGAAT ACCTTGGTAA AATAGCGTCC AAATACGGAG TCAGCGTTTC GAGCATTCGT AAAGCGAACA ACTTACGCTC CGATCAGCTG GCGGTTGGGC AAGTCCTTAT CATTCCAAAC AAATAG
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Protein sequence | MLSFSNFRVV ATFVATFLLL IPNLAFANVV KSFRVWPSPD ETRVVIDLGS EADYSYFSLS GPDRLVVDLK STTMQAKLPV TVTDSPVLKL VRKSSPPEKG TYRLVFELKK SVQAELFKLS PTPGGQYGHR LVIDLPHGKK ASTSASKPSK PAATSKDMSS VQRAQEVLIV IDPGHGGEDP GSIGPSRRKY EKDAVLSISR KIAAQLDATP GIKTRMTRTG DYFVNLNRRV AIARENDAHL LISIHADAFT SPKPRGGSVF VLNTRRANTE IARWVENHEK QSEILGGSGN AFFTKTKDRN VNQTLLDLQF SHSQKEGYKL ATEILGEMGR VAHLHNTKPI NTSLAVLRSP QIPSVLVETG FISNPTEERL LFQRAHQDKL AQAITKAVVK YLKDNPPEGT VFSPSAKPIV HTVKRGESLS VIANKYGLSS KALMSANNLK STGLAIGQKL KIPSAGTIKV PSKPITVETE TIIHKVKSGE FLGKIASHYK VKVSDIRREN NLKSDTLWVG QKLKITVAVK DKPIRKHKVS RGEYLGKIAS KYGVSVSSIR KANNLRSDQL AVGQVLIIPN K
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