Gene VEA_002252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002252 
Symbol 
ID8555925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp701447 
End bp701992 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID646405289 
Productoligoribonuclease 
Protein accessionYP_003284880 
Protein GI262393026 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000410797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTTA GCGATCAAAA CCTAATTTGG GTTGATTTAG AGATGACAGG GCTTGATCCT 
GAAACGCACA AAATCATTGA AATTGCTTCT ATTGTCACGG ATAGCGAGCT AAATATTTTG 
GCTGAAGGTC CAGTATTAGC GATTCATCAG CCGGAAGAAG AGCTAGCGAA AATGGACGAT 
TGGTGCACCA ATACGCATAC GGCAAGCGGC TTGGTGGAAC GCGTTCGCAA CAGTAAAATC 
TCAGAACAAG ATGCGGTCGC ACAAACCATT GAATTCTTAG AAAAATGGGT GCCGAAAGGG 
GCGTCGCCAA TATGTGGTAA CAGCATTGGG CAGGATCGTC GCTTCTTGTA CAAACACATG 
CCGGAATTAG AAGAGTTCTT TCATTACCGA TATGTTGACG TCAGCACTCT TAAAGAATTG 
GCGCGTCGTT GGCAACCTGA AGTATTAAAT GGGTTCACAA AACAGGGAAC ACATTTGGCC 
TTGGACGACA TTCGCGAGTC GATTGCAGAA CTTAAGTACT ATCGTGGTAC TATTTTCAAG 
ATTTAA
 
Protein sequence
MSFSDQNLIW VDLEMTGLDP ETHKIIEIAS IVTDSELNIL AEGPVLAIHQ PEEELAKMDD 
WCTNTHTASG LVERVRNSKI SEQDAVAQTI EFLEKWVPKG ASPICGNSIG QDRRFLYKHM 
PELEEFFHYR YVDVSTLKEL ARRWQPEVLN GFTKQGTHLA LDDIRESIAE LKYYRGTIFK 
I