Gene VEA_002231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002231 
Symbol 
ID8555904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp679752 
End bp680774 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID646405268 
Productlysine 2,3-aminomutase 
Protein accessionYP_003284859 
Protein GI262393005 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCACA TAATAACCCG AAAAGTCGAA TCTGTTGAGC AAAACTGGCT CAAACAGTTG 
GCGAATGGGA TCTCTGATCC TGCAAAATTG CTCGAAATAC TGGAAATAGA TCCTTCACCG
TGGCAAGACG GGTTTGCCGC GCGCAAGCTG TTTGCACAGC GTGTACCGCA AAGTTTTGTC
GATAGGATGG AGAAAGGCAA CCCTAAAGAC CCTCTTTTAC GTCAGGTTTT ACCATTAAGT
GACGAATTTG AAGTACATCC GGGCTATTCC AACGATCCGT TAGAAGAGCA GGATAATGAA
GTCCCTGGTC TGCTACACAA GTATCGCAAC CGCGCCTTAA TGATCGTCAA AGGTGGCTGC
GCGGTAAATT GCCGTTACTG TTTTCGTCGT CACTTCCCTT ATCAAGAAAA TAAAAGCGGC
AAGCAGGCAT GGACAAAGTG CTTAGAGTAC ATGGCGCAGC AACCAGAGTT GAACGAAGTC
ATCTTCTCAG GTGGTGATCC ATTAATGGCA AAAGACGATG AAATTCATTG GCTTTTAGAG
CATATTGCTC ACATACCTCA CATCAAACGT CTGCGTATTC ATAGCCGTTT ACCTGTGGTG
ATTCCCGCTC GCGTCACTGA TGAACTATGC CAACTGCTGC AAGCATCAAG GTTACAAATC
ATCCTCGTGA CTCACATCAA CCATGCCAAC GAAATCAATG ACGAATTTGC TGAACAGATG
TTCAAGCTCA AAAGAGCAGG CGTTACGCTT CTAAACCAAG GCGTTCTGCT GAAAGGCGTG
AATGATTCGG TAGAAGCTCA AGTGGCGTTA AGTGAAGCCT TATTTGACGC GGGTATCTTG
CCTTATTACC TCCACGTTCT TGATAAGGTG CAAGGCGCGG CGCACTACTT TATTTCGGAC
GAAGAAGCAA AAGCCATTAT GCGCGGACTC ATCACGCGTG TATCGGGTTA CCTGGTACCA
AAACTGACAC GAGAAATTGG TGGCAGGCCA AGTAAAACGC CATTGGATTT GCATTTAGAA
TAG
 
Protein sequence
MPHIITRKVE SVEQNWLKQL ANGISDPAKL LEILEIDPSP WQDGFAARKL FAQRVPQSFV 
DRMEKGNPKD PLLRQVLPLS DEFEVHPGYS NDPLEEQDNE VPGLLHKYRN RALMIVKGGC
AVNCRYCFRR HFPYQENKSG KQAWTKCLEY MAQQPELNEV IFSGGDPLMA KDDEIHWLLE
HIAHIPHIKR LRIHSRLPVV IPARVTDELC QLLQASRLQI ILVTHINHAN EINDEFAEQM
FKLKRAGVTL LNQGVLLKGV NDSVEAQVAL SEALFDAGIL PYYLHVLDKV QGAAHYFISD
EEAKAIMRGL ITRVSGYLVP KLTREIGGRP SKTPLDLHLE