| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002223 |
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| Symbol | |
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| ID | 8555896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 670768 |
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| End bp | 672054 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405260 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_003284851 |
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| Protein GI | 262392997 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.851646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGG GCATGATCGC GATTTTGATG TTTAACTTGG TGGACACGTT TTTTATCTCG
TTGCTTGGTA CTCAAGCGCT AGCGGCGATC AGCTACACCT TCCCTGTAAC CTTTGCGGTT
AACTGCATCA CGATGGGGAT AGGGATGGGT CTTTCGACCA ACATTGGTCG CTTACTTGGA
CAAGGTCACG CCCCACAAGC CGCTCGGTTT ACCACTCACG GTTTGTTGTT AGCGGTGTTA
CTCGTGGCTA TCGCCTCTTC GATTGGCTTT GCCACTATTG CACCTCTGTT CCGCTTTCTT
GGCGCAGCCG ACGACCTAAT TCCACTTATC GAAGAGTACA TGCAGGTGTG GTATCTCACC
ATTCCATTGT TGGTGATCCC GATGGCAGGC AACAGTGCGA TACGAGCATC TGGGGATACA
AAAACACCCG CCAAAATCAT GATGTTGGCA GGCTTGATTA ACGGCATACT CGATCCACTA
CTGATCTTCG GACTTGGCCC ATTCCCCGAG CTTGGTATCC AAGGTGCGGC AATAGCCAGT
GCTTTTAGCT GGTTAGGTGC ACTATGTGGC TCATTCTATG TGCTAGTTAA ACGCGAAAAG
TTGCTCGCTC AACCCCAATG GTCCTTACTG AAACAAGATT GGCAGCAAAC GTTAAAAATC
GGCACTCCTG CCGCACTGTC GAACGCGATG AATCCATTGT CGGGCGCAAT TTTGATGATG
CTTTTATCCA ACCACGGTAC GGCAGCAGTT GCGGCTTACG GTGCGGCGCA GCGTATTGAG
TCTATTTTGA TCCTAGTCTT GATGTCTCTG ACCTCAGCAC TCACGCCATT CATGGCACAA
AACTTAGGGG CGAAAAACCC TCAACGCGCC TTTTCCGGCT TATTTATCAG CATGCGTTTT
GCGGTGGTGT TCCAAGGGTT TATCTTCTTG ATGATGGTGC CATTGAGTAT TCCTCTAGCG
GCATTGTTCT CGCAGGAAGA AGCGGTTAAA AATCTGCTGT GGCATTACCT GCTTGTGGTG
CCGTTCAGTT ATGGTTTTCA AGGCATTGTG ATGATGTTAA TCAGTGGTTT GAATGCGATG
CACAAACCAT TACGAGCATT TCAATGGAGC TTTATGCGTT TGTTTGTGTT TACCCTGCCA
TCGGCATGGA TCGGAAGCCA AATTTACAGT ATTGAAGGCT TGTTTATAGG TATCGCAGTG
GGGAATACGT TAGGTGGCCT ACTTGGCTAT ATGTTTGCAC TGCGCGAACG TAAATTGACG
CTCATTGAAC AGAGCAGCGC TTCGTAA
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| Protein sequence | MTMGMIAILM FNLVDTFFIS LLGTQALAAI SYTFPVTFAV NCITMGIGMG LSTNIGRLLG
QGHAPQAARF TTHGLLLAVL LVAIASSIGF ATIAPLFRFL GAADDLIPLI EEYMQVWYLT
IPLLVIPMAG NSAIRASGDT KTPAKIMMLA GLINGILDPL LIFGLGPFPE LGIQGAAIAS
AFSWLGALCG SFYVLVKREK LLAQPQWSLL KQDWQQTLKI GTPAALSNAM NPLSGAILMM
LLSNHGTAAV AAYGAAQRIE SILILVLMSL TSALTPFMAQ NLGAKNPQRA FSGLFISMRF
AVVFQGFIFL MMVPLSIPLA ALFSQEEAVK NLLWHYLLVV PFSYGFQGIV MMLISGLNAM
HKPLRAFQWS FMRLFVFTLP SAWIGSQIYS IEGLFIGIAV GNTLGGLLGY MFALRERKLT
LIEQSSAS
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