Gene VEA_002200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002200 
Symbol 
ID8555873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp642924 
End bp643553 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID646405237 
ProductDNA polymerase III epsilon subunit 
Protein accessionYP_003284828 
Protein GI262392974 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGT TACAACGCAA ATACTGGCAC TACAAACTGA AAGGCTCTTC TTATCAGTCG 
CTTTTTTGCA CGCCCGATAA AACGGAATAC GTTTCTCTCG ACTGCGAAAC CACCAGCCTT 
GATCCAAATC GCGCCGAGTT GGTGACCATT GCGGCCACGA AGATCATCGA CAACCGCATC 
ATCACTAGCC AGCCATTTGA AGTCCGCTTA CGCGCGCCGC AATCGCTCGA TTCTGGCTCA 
GTCAAAATTC ATCGAATTCG CCACCAAGAC TTAGTCGACG GGATTAGCGA AAAAGAGGCG 
CTGCTCGAGC TGCTCGACTT TATCGGCAAC CGACCACTTG TCGGTTATCA CATTCGTTAC 
GATAAAAAGA TCTTAGATCT TGCTTGTCTG AGGCAACTTG GCTTTCCACT TCCTAACCCG 
CTCATCGAGG TCAGTCAGAT TTATCACGAC AAGCTGGAAA GACATTTGCC GAATGCCTAT 
TTCGACTTAA GTCTGGATGC GATTTGTAAA CACCTCGAAC TTCCTATCCA AGATAAACAC 
GACGCTTTAC AAGATGCGAT TTCTGCCGCT TTGGTCTTTG TTCGCTTAAC GAAAGGCGAT 
TTGCCCAACC TAACCGCGCC GTATACATAA
 
Protein sequence
MNWLQRKYWH YKLKGSSYQS LFCTPDKTEY VSLDCETTSL DPNRAELVTI AATKIIDNRI 
ITSQPFEVRL RAPQSLDSGS VKIHRIRHQD LVDGISEKEA LLELLDFIGN RPLVGYHIRY 
DKKILDLACL RQLGFPLPNP LIEVSQIYHD KLERHLPNAY FDLSLDAICK HLELPIQDKH 
DALQDAISAA LVFVRLTKGD LPNLTAPYT