| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002194 |
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| Symbol | |
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| ID | 8555867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 635936 |
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| End bp | 636799 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405231 |
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| Product | tRNA dihydrouridine synthase B |
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| Protein accession | YP_003284822 |
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| Protein GI | 262392968 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000238553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCA GTGAAATGAT GTCTGCTAAC CCAAAACTAT GGGGAACGTC AAAGTCGAAA
CAGCGCATGG TACACGAGGG CGAATCGGGC ATTCGCTCTG TACAGATTGC GGGTTCCGAT
CCACAGCTTA TGGCGGACGC AGCTCAATTC AGTGTTGAGA ACGGTGCACA AATCATCGAC
ATCAACATGG GCTGCCCGGC AAAAAAAGTG AATAAGAAGC TAGCGGGCTC TGCTCTGCTT
CAATACCCAA ACATTATCGA AGAGATTTTG AAAGCGGTCG TGAATGCAGT GGACGTTCCT
GTAACGTTAA AGACTCGAAC TGGCTGGGAT ACAGACAACA AGAACTGTGT CCAGATCGCT
AAATTAGCCG AAAACTGCGG CATACAAGCT CTTGCTCTGC ATGGCAGAAC GAAAGCATGT
ATGTACAAAG GTGAGGCCGA ATATGACAGC ATTAAAGCGG TAAAAGAGGC GATTTCAATT
CCGGTTATCG CGAACGGTGA TATCGATAGC CCGGAGAAAG CCAAATTTGT ACTGGAGTAC
ACCGGTGCGG ACGCTTTAAT GATTGGACGC CCTGCCCAGG GTCGTCCGTG GATTTTCCAG
GAAATCCATC ACTATTTGGA AAACGGCACC ACAATGGAGG AGCTTCCAAC TGAGGAAGTG
AAAACCATTA TGCTTGGTCA TGTAAATGCT CTGCATGAAT TTTATGGGGA GTACTTAGGC
CCACGTATCG CGCGCAAGCA CGTTGGGTGG TACCTAAAAG AGCATGAACA GGCAAGTGAG
TTTCGCCGTA CCTTCAACGC TATCGACGCA GCTCCGCTGC AAATTGAGGC GTTAGAAGGT
TATTTTGATA ACGTTGCATC ATAA
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| Protein sequence | MAVSEMMSAN PKLWGTSKSK QRMVHEGESG IRSVQIAGSD PQLMADAAQF SVENGAQIID
INMGCPAKKV NKKLAGSALL QYPNIIEEIL KAVVNAVDVP VTLKTRTGWD TDNKNCVQIA
KLAENCGIQA LALHGRTKAC MYKGEAEYDS IKAVKEAISI PVIANGDIDS PEKAKFVLEY
TGADALMIGR PAQGRPWIFQ EIHHYLENGT TMEELPTEEV KTIMLGHVNA LHEFYGEYLG
PRIARKHVGW YLKEHEQASE FRRTFNAIDA APLQIEALEG YFDNVAS
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