| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002189 |
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| Symbol | |
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| ID | 8555852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 618177 |
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| End bp | 620312 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405216 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_003284817 |
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| Protein GI | 262392963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000318347 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT TCGCTATCTT GAACCACATG GGTGTGTTCT TTAAAGAAGA GCCAGTTCGT
CAACTTCACG CTGCTCTTGA GAAAGCGGGC TACGAAGTGG TTTACCCAGT AGATGATAAA
GACTTGATCA AAATGATTGA GATGAACCCA CGCATTTGCG GTGTGCTGTT CGACTGGGAT
AAATACTCAC TAGAGCTATG TGAACGTATT AGCCAAATCA ACGAAAAACT GCCTGTTCAC
GCATTTGCTA ACGAACAGTC TACTCTAGAC ATTTCACTAA CAGACCTACG TCTAAACGTG
AGCTTCTTCG AGTACGCTTT AGGTATGGCT GACGACATCG CTATCAAAAT CAACCAAGCG
ACTGAGGCAT ACAAAGATGC CATCATGCCT CCATTCACTA AAGCGTTATT CAAATACGTA
GAAGAAGGTA AATACACCTT CTGTACTCCA GGTCACATGG GCGGTACTGC ATTCCAGAAA
AGCCCTGCTG GTAGCATCTT CTACGATTTT TACGGTCCAA ACACATTTAA AGCGGACGTA
TCAATCTCAA TGCCTGAGCT AGGTTCTCTA CTAGACCACT CAGGTCCACA TAAAGATGCA
GAAGAATACA TCGCACGCAC ATTCAATGCA GACAGCTCGT ACATCGTAAC GAACGGTACG
TCTACATCGA ACAAAATTGT TGGCATGTAC TCAGCACCTG CGGGCAGCAC AGTACTGATT
GACCGTAACT GTCACAAATC TCTGACTCAC CTAATGATGA TGAGCGACGT GACACCAATC
TACTTCCGCC CAACTCGTAA CGCATACGGC ATCCTTGGTG GTATTCCACA AAGCGAATTC
AGCCGAGATG TCATTGCAGA GAAAGTGGCG AAAACACCAG GTGCAACAGC GCCAAGTTAC
GCAGTAGTGA CTAACTCAAC TTACGATGGC TTGTTGTACA ACACACAATT CATCAAAGAG
TCGCTAGACT GTAAACACAT CCACTTCGAC AGTGCTTGGG TGCCTTACAC TAACTTCAAC
CCAATTTACG AAGGTAAATG TGGTATGAGT GGTGAAGCGA TGCCAGGCAA AGTGTTCTAC
GAAACACAAT CAACACACAA ACTGTTGGCA GCGTTCTCAC AAGCTTCAAT GATTCACGTG
AAAGGTGACT TTGATAAAGA GTCTTTCAAC GAAGCATTCA TGATGCACAC TTCAACTTCA
CCTCAGTACG GCATTGTGGC TTCTACTGAA ACTGCAGCGG CAATGATGCG CGGCAACACT
GGTAAGAAGT TGATGCAAGA CTCTATCGAT CGCGCAATCC GCTTCCGTAA AGAGATCAAA
CGCCTAGAAG CAGAAAGTGA CAGCTGGTTC TTCGATGTAT GGCAACCAGA AAACATCGAT
ACCACGGAAT GTTGGAAACT AGACCCTAGC GACACATGGC ACGGCTTCAA GAACATGGAT
GACAACCACA TGTATCTTGA TCCAATCAAA GTAACGCTAC TAACTCCGGG GATGAATAAA
GAAGGCGAAC TAGAAGAATC AGGTATTCCT GCTTCGCTGG TGGCTAAATT CCTAGACGAG
CGCGGCATCG TGGTAGAGAA AACAGGTCCA TACAACTTGT TGTTCCTATT CTCAATCGGT
ATCGACAAAT CAAAAGCAAT GCAATTGCTA CGCGGTCTGA CTGAATTTAA ACGTGGGTAC
GACTTGAACC TAACCATCAA GAGCTTCCTA CCTTCGCTAT ATAATGAAGA CCCAAGCTTC
TATGAAGGCA TGCGCGTTCA AGAATTAGCA CAAGCGATTC ACAACCTAAC TAAGAAATAC
AATCTACCAG AGCTAATGTA CAAAGCGTTC GATGTTCTTC CTGAAATGAA AGTAACACCA
CACGCAGCAT GGCAAGAAGA GCTTCGCGGT AACGTAGAAG AAATCAAACT GGAAGAAATG
GTTGGTCGCG TAAGTGCGAA CATGATCCTT CCTTACCCTC CAGGCGTGCC ACTAGTACTT
CCTGGTGAAA TGGTGACTCA AGAGTCTCGC CCTGTGCTGG ACTTCCTAGA GATGCTTTGT
GAGATCGGTG CGCATTACCC AGGTTTCGAA ACCGACATCC ACGGTCTGTA CCAACAAAAA
GATGGTAGCT ACACTGTAAA AGTATTGAAG AACTAA
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| Protein sequence | MNIFAILNHM GVFFKEEPVR QLHAALEKAG YEVVYPVDDK DLIKMIEMNP RICGVLFDWD
KYSLELCERI SQINEKLPVH AFANEQSTLD ISLTDLRLNV SFFEYALGMA DDIAIKINQA
TEAYKDAIMP PFTKALFKYV EEGKYTFCTP GHMGGTAFQK SPAGSIFYDF YGPNTFKADV
SISMPELGSL LDHSGPHKDA EEYIARTFNA DSSYIVTNGT STSNKIVGMY SAPAGSTVLI
DRNCHKSLTH LMMMSDVTPI YFRPTRNAYG ILGGIPQSEF SRDVIAEKVA KTPGATAPSY
AVVTNSTYDG LLYNTQFIKE SLDCKHIHFD SAWVPYTNFN PIYEGKCGMS GEAMPGKVFY
ETQSTHKLLA AFSQASMIHV KGDFDKESFN EAFMMHTSTS PQYGIVASTE TAAAMMRGNT
GKKLMQDSID RAIRFRKEIK RLEAESDSWF FDVWQPENID TTECWKLDPS DTWHGFKNMD
DNHMYLDPIK VTLLTPGMNK EGELEESGIP ASLVAKFLDE RGIVVEKTGP YNLLFLFSIG
IDKSKAMQLL RGLTEFKRGY DLNLTIKSFL PSLYNEDPSF YEGMRVQELA QAIHNLTKKY
NLPELMYKAF DVLPEMKVTP HAAWQEELRG NVEEIKLEEM VGRVSANMIL PYPPGVPLVL
PGEMVTQESR PVLDFLEMLC EIGAHYPGFE TDIHGLYQQK DGSYTVKVLK N
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