Gene VEA_002188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002188 
Symbol 
ID8555851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp616717 
End bp618060 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content47% 
IMG OID646405215 
Productlysine/cadaverine antiporter membrane protein CadB 
Protein accessionYP_003284816 
Protein GI262392962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000189693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCGA ATACGAAAAA AATCGGCCTA ATTGCCTGTA CGGGTGTAGT CGCCGGTAAC 
ATGATGGGCA GTGGTATTGC ACTGTTACCT TCTAGCCTAG CTTCAGTAGG CTCTGTTTCA
ATTTTCAGCT GGCTGATCTG TTTGATCGGT GCACTGAGCC TTGCGTTTGT TTACGCTCGT
CTGGCAACCA AAAACCCTCA AGAAGGTGGT CCTATCGCTT ATGCGGGCGA AGTTTCCCCA
GTCTTTGGTT TCCAAACGGG CGTGCTTTAT TACCACGCGA ACTGGATTGG TAACCTAGCT
ATTGCTATTA CAGGTGTTTC TTACCTTTCA GTATTCTTCC CTGTGCTTAA TGACCCAATC
CCAGCAGGTA TTGCGACGAT TGCATCGGTA TGGATCTTCA CTTTCGTCAA CCTACTTGGT
GGTAGCTGGG TAAGCCGTCT ATGTACGCTT GGTCTTGTTC TAATCCTAAT TCCAGTTGTT
GGTACCGCTC TATTTGGTTG GACGCACTTC GACACTGCGC TATACAGCCA AAACTGGAAC
GTATCTGCGG GTACTGATAG CCATGCGATT GTGACTGCGG TTCTTATCTG TCTATGGTCA
TTCGTTGGTG TGGAATCAGC AGCAGTATCG ACAGGTATGG TAGAAAACCC TAAACGTACT
GTACCGCTAG CAACCATGCT GGGTACTGGT ATCGCAGGTG TGATTTACAT CCTATCAACT
CAAATGATCA GCGGCATGTT CCCTGCTTCT GAAGTCGCGG CATCAGGTGC GCCATTTGCA
TTGGCTACCA CTGAGCTATT CGGTAGCTGG ACAGCACCAT TCGTATCAGC ATTCACAGCA
CTAGCATGTT TTACTTCGCT AGGTTCTTGG ATGATGCTGG TGGGCGAAGC TGGTAAACGT
GCAGCAAGCG ATGGCAACTT CCCTAAAATC TACGGCGAAA CTGACAAAAA CGGTGTGCCT
AAGAAAGGTT TAATCCTTGC GTCAATCAAG ATGACAGCAT TAATGGTTGT ACTGATGTTC
TTCAGCTCTA AAACAGCACA CGCATCAGAC CTGTTCAACC AGCTAACGAC TGATGCAGTT
CTACTAACTA TGCTGCCTTA CTTCTACTCA AGCATTAACT TGATTCGCTT CGAAGGTATG
ACAACACGCA ACGGCTTCGT AATGCTGTTC TCTGGTGTAG CTTGTCTGTT CTGCTTCATT
GCCCTTGCTG GTGCAGAAGG CGGTACGCTA ACAGCAACCT TCATCGTGTC TCTCGTTATC
TTGATGTTCT ACAGCAAAAA AGCCGGCTTA GCTCAGTACA TGAAGCTACA CGCTGACGAC
ATGCCTGCTC AAGCAAGCAA CTAA
 
Protein sequence
MSSNTKKIGL IACTGVVAGN MMGSGIALLP SSLASVGSVS IFSWLICLIG ALSLAFVYAR 
LATKNPQEGG PIAYAGEVSP VFGFQTGVLY YHANWIGNLA IAITGVSYLS VFFPVLNDPI
PAGIATIASV WIFTFVNLLG GSWVSRLCTL GLVLILIPVV GTALFGWTHF DTALYSQNWN
VSAGTDSHAI VTAVLICLWS FVGVESAAVS TGMVENPKRT VPLATMLGTG IAGVIYILST
QMISGMFPAS EVAASGAPFA LATTELFGSW TAPFVSAFTA LACFTSLGSW MMLVGEAGKR
AASDGNFPKI YGETDKNGVP KKGLILASIK MTALMVVLMF FSSKTAHASD LFNQLTTDAV
LLTMLPYFYS SINLIRFEGM TTRNGFVMLF SGVACLFCFI ALAGAEGGTL TATFIVSLVI
LMFYSKKAGL AQYMKLHADD MPAQASN