Gene VEA_002177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002177 
Symbol 
ID8555840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp604561 
End bp605628 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content48% 
IMG OID646405204 
Producturoporphyrinogen III decarboxylase 
Protein accessionYP_003284805 
Protein GI262392951 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAAAAAATGA TCGTTATCTG CGTGCGCTTT TAAAAGAGCC GGTAGATTAC 
ACGCCAGTAT GGATGATGCG CCAGGCAGGT CGTTACCTAC CAGAATACAA AGCGACTCGT
GCAGAAGCGG GTGATTTCAT GTCTTTGTGT CGAAATGCAG AATTAGCATC CGAAGTGACA
CTTCAACCAT TACGCCGTTT TCCTCTTGAT GCCGCGATCT TATTCTCGGA CATCTTAACG
ATTCCAGATG CAATGGGGCT TGGTTTACGT TTTGCTGCGG GCGAAGGACC TGTTTTTGAT
AACCCAATTA CATGCAAAGC TGACGTGGAA AAAATTGGTT TGCCAGATCC AGAAGGTGAA
CTGCAATATG TAATGAACGC AGTACGTCAG ATCCGTAAAG ACCTTAAGGG TGAAGTGCCG
TTAATTGGCT TCTCTGGTAG CCCGTGGACT CTTGCTACGT ACATGATCGA AGGTGGCAGT
TCTAAAGCCT TCACCAAGAT CAAGAAAATG ATGTACGCGG AACCACAAAC TCTGCACTTA
CTTCTAGATA AGCTGGCAGA CAGCGTTATC GAGTACCTAA ACGCGCAAAT TAAAGCAGGC
GCGCAGTCGG TAATGGTATT TGACACATGG GGTGGCGTAC TGACGCCTCG TGACTACAAC
CTGTTCTCAC TGCAATACAT GCACAAGATT GTAGATGGTC TGATTCGTGA AAACGATGGT
CGTCGCGTGC CAGTCACACT GTTTACTAAG AATGGCGGTA TGTGGCTTGA GCAAATCGCA
GCAACGGGCT GTGATGCGGT TGGTCTAGAC TGGACAATCA ACATTGCAGA CGCGAAAGCA
CGTATCGGTG ATAAGGTGGC GCTGCAAGGT AACATGGACC CATCAATGCT TTACGCTTCG
CCAGAGCGCA TCCGTGAAGA AGTAGCGGAT ATCCTAGAAG GATTTGGTGA TACGGGGACT
GGTCATGTGT TCAACCTAGG TCACGGTATC CACTTGGATG TACCGCCAGA AAACGCGGGC
GTATTTGTGG AAGCGGTACA CGAGTTATCT AAGCCGTACC ACAAGTAA
 
Protein sequence
MTELKNDRYL RALLKEPVDY TPVWMMRQAG RYLPEYKATR AEAGDFMSLC RNAELASEVT 
LQPLRRFPLD AAILFSDILT IPDAMGLGLR FAAGEGPVFD NPITCKADVE KIGLPDPEGE
LQYVMNAVRQ IRKDLKGEVP LIGFSGSPWT LATYMIEGGS SKAFTKIKKM MYAEPQTLHL
LLDKLADSVI EYLNAQIKAG AQSVMVFDTW GGVLTPRDYN LFSLQYMHKI VDGLIRENDG
RRVPVTLFTK NGGMWLEQIA ATGCDAVGLD WTINIADAKA RIGDKVALQG NMDPSMLYAS
PERIREEVAD ILEGFGDTGT GHVFNLGHGI HLDVPPENAG VFVEAVHELS KPYHK