Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002177 |
Symbol | |
ID | 8555840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 604561 |
End bp | 605628 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405204 |
Product | uroporphyrinogen III decarboxylase |
Protein accession | YP_003284805 |
Protein GI | 262392951 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TAAAAAATGA TCGTTATCTG CGTGCGCTTT TAAAAGAGCC GGTAGATTAC ACGCCAGTAT GGATGATGCG CCAGGCAGGT CGTTACCTAC CAGAATACAA AGCGACTCGT GCAGAAGCGG GTGATTTCAT GTCTTTGTGT CGAAATGCAG AATTAGCATC CGAAGTGACA CTTCAACCAT TACGCCGTTT TCCTCTTGAT GCCGCGATCT TATTCTCGGA CATCTTAACG ATTCCAGATG CAATGGGGCT TGGTTTACGT TTTGCTGCGG GCGAAGGACC TGTTTTTGAT AACCCAATTA CATGCAAAGC TGACGTGGAA AAAATTGGTT TGCCAGATCC AGAAGGTGAA CTGCAATATG TAATGAACGC AGTACGTCAG ATCCGTAAAG ACCTTAAGGG TGAAGTGCCG TTAATTGGCT TCTCTGGTAG CCCGTGGACT CTTGCTACGT ACATGATCGA AGGTGGCAGT TCTAAAGCCT TCACCAAGAT CAAGAAAATG ATGTACGCGG AACCACAAAC TCTGCACTTA CTTCTAGATA AGCTGGCAGA CAGCGTTATC GAGTACCTAA ACGCGCAAAT TAAAGCAGGC GCGCAGTCGG TAATGGTATT TGACACATGG GGTGGCGTAC TGACGCCTCG TGACTACAAC CTGTTCTCAC TGCAATACAT GCACAAGATT GTAGATGGTC TGATTCGTGA AAACGATGGT CGTCGCGTGC CAGTCACACT GTTTACTAAG AATGGCGGTA TGTGGCTTGA GCAAATCGCA GCAACGGGCT GTGATGCGGT TGGTCTAGAC TGGACAATCA ACATTGCAGA CGCGAAAGCA CGTATCGGTG ATAAGGTGGC GCTGCAAGGT AACATGGACC CATCAATGCT TTACGCTTCG CCAGAGCGCA TCCGTGAAGA AGTAGCGGAT ATCCTAGAAG GATTTGGTGA TACGGGGACT GGTCATGTGT TCAACCTAGG TCACGGTATC CACTTGGATG TACCGCCAGA AAACGCGGGC GTATTTGTGG AAGCGGTACA CGAGTTATCT AAGCCGTACC ACAAGTAA
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Protein sequence | MTELKNDRYL RALLKEPVDY TPVWMMRQAG RYLPEYKATR AEAGDFMSLC RNAELASEVT LQPLRRFPLD AAILFSDILT IPDAMGLGLR FAAGEGPVFD NPITCKADVE KIGLPDPEGE LQYVMNAVRQ IRKDLKGEVP LIGFSGSPWT LATYMIEGGS SKAFTKIKKM MYAEPQTLHL LLDKLADSVI EYLNAQIKAG AQSVMVFDTW GGVLTPRDYN LFSLQYMHKI VDGLIRENDG RRVPVTLFTK NGGMWLEQIA ATGCDAVGLD WTINIADAKA RIGDKVALQG NMDPSMLYAS PERIREEVAD ILEGFGDTGT GHVFNLGHGI HLDVPPENAG VFVEAVHELS KPYHK
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