Gene VEA_002176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002176 
Symbol 
ID8555839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp603516 
End bp604313 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID646405203 
ProductNADH pyrophosphatase 
Protein accessionYP_003284804 
Protein GI262392950 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAA AAGGTGATGT TAACCGCGCG ATAAATGCAT ACTGGTGTGT TGTTGCAGGA 
AGTGAAATTT GGCTGGTGGA TGGTGCTGTG CCTTTCGGGT CTGCAGAGCA GTTATCACTG
CCTGAAGTGA GTGCAAGACC CATTGGTGAG TATTCAGGTT CGCCCGTCAT GTGGCTTAAT
TTGTCTGATC TGGAGCATGA TCTACCATTA GTCTCACTAC GCGACTGCCT GCATTTTCCT
GAGCCATTAT TTATGTTGTT AAGTAAAGCG GTCCAGTATG GGCACATGAC GCAAAGTCTG
CGTTTTTGCC CACAGTGCGG TGGAAGAAAC TTTCTTAATA ATAACCAGTT AGCTATGCAG
TGTGGCGAAT GCCGTACTCT CCATTATCCT CGAATATTTC CATGTATTAT CGTTGCTGTG
CGTAAAGAGA ATCAGATCTT ATTGGCTCAA CATCCAAGGC ATCGAAATGG TATGTATACC
GTCATTGCCG GTTTTCTAGA AGTTGGTGAG ACATTAGAAG AGTGTGTGGC TCGAGAAATT
CATGAAGAAA CAGGAATTCT CGTTAAAAAT ATTCGTTACT TTGGCAGCCA GCCTTGGGCT
TTCCCATCGA GTATGATGAT GGGGTTTTTA GCTGACTATG AATCGGGAGA GTTAAGTCCA
GACTACACTG AGCTGTCTGA TGCACAATGG TTTGGTATTG ACGAGATGCC GCCTGTTGCG
CCTAAAGGAA CGATTGCAAG AGCGCTTATC GAACAAACGC TACAAGATAT TGATTCTAAT
TATCTGATAA ATAGATAA
 
Protein sequence
MLRKGDVNRA INAYWCVVAG SEIWLVDGAV PFGSAEQLSL PEVSARPIGE YSGSPVMWLN 
LSDLEHDLPL VSLRDCLHFP EPLFMLLSKA VQYGHMTQSL RFCPQCGGRN FLNNNQLAMQ
CGECRTLHYP RIFPCIIVAV RKENQILLAQ HPRHRNGMYT VIAGFLEVGE TLEECVAREI
HEETGILVKN IRYFGSQPWA FPSSMMMGFL ADYESGELSP DYTELSDAQW FGIDEMPPVA
PKGTIARALI EQTLQDIDSN YLINR