Gene VEA_002156 details

Gene Information

• Locus tag: VEA_002156
• ID: 8555811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 573647
• End bp: 575482
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 646405175
• Product: outer membrane vitamin B12 receptor BtuB
• Protein accession: YP_003284784
• Protein GI: 262392930
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor; [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000122091
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAT CCGCACTGGC GATCACTTTG GCATCGCTGC TTTCACCTGT CTCTTATCTA 
CAGGCCCAAG AAACCTCCAC TGACGAAACC ATCGTTGTGA CTGCAAACCG TTTTGAGCAA 
GCCGAAAGCC GTACGTTGGC AGATGTCGAA GTGGTTACTC GACAAGACAT CGATCGCATT 
CAAGCGAAAA CCCTACCAGA TGTATTGCGT CGTCTTACGG GGATTCAAGT TTCACAAAAT 
GGTGGTCGTG GTCAGTTAGC GTCTTTATTT GTTCGTGGTA CCAGTTCCGA CCAAGTTCTA 
GTCCTGGTTG ATGGCGTACG TTTTGCACGA GCAGCGAAGG GCGCTGTGGA CTTTAACCAA 
ATCCCACTTA CTTACGTTCA ACGGATTGAG TACGTGCGTG GTGCGCGTGC GTCACTTTAT 
GGCTCAGAAG CGATTGGTGG CGTGATCAAT ATCATCACCA TTGCGCGTGC TGACGAAGAA 
GGAACGAAGT TAAGTGCGGG TTTAGGTAGC TTAGATTACC AAGAATTGAG TGTGGCATCT 
GGCATTAAAG TCACAGAGAG CGGCCAGCTG AATATCGCGC TTGGTAGTGA AAGTGATGAT 
GGTTATAACG TTCGTCCTGT ACCGGGAGTT AATGACGGCG ATCGCCATGG CTTTGATACA 
AAGAATGGTC TGCTAGGTTA CGTGCATAAC TTCAATGACC AGTGGTCTGT ATTTGGTAAC 
CTACGTGCTT ACGAAAATGT TTATCAATAT GACAGCAGCT ACGGCAGTCG CGGTTATTAC 
GAAGCAGAAA AAGACGACCT TTCTGCCACT CTGGGCGGTA AGTATCAGTC TGGTAACGTG 
ATGTCAGAAC TACAAGTAAC GGCACAGAAA CAGAAGTCTT GGAACTATGA GCAAGCAAAA 
GGCAAACACT CAGGTACTGA AGATGAACTT GAGCAGCAAA ATGTCCAGTG GACCAACAGT 
TACTTGCTAA ACAACAATAC GACGTTTGCT GGTGGTATTG ATTGGCGTAA TGAGTCTTAT 
AAAGACAAGA GTGCGAATAA AACGTTTGAT CGTACCAATG GCGCTCTGTT TGGTATGGCA 
ACCACTAGTA TTGATAAAGC AATGCTTGAG GGCAGTGCTC GCTTGGATGA TAACGAAGAA 
TACGGTAGTG AGTTCACTTA CAGTTTAGCG GCTGGTTACC AGTTTGTGCC AGAGTTTGGG 
GTTAAAGCTT CTTTTGGTAC TGCGTTTAAG GCTCCAAACC TATATCAACA GTATGACCCA 
ACGTACGGTG AGAAAGATCT TAAGCCGGAA GAGTCAGATG CTTGGGAGCT AGCATTCAGC 
GGTGATGTCC AAGGCGTTTT TTGGTCCGTC ACGGGTTATG ACTATAAAAT CACGAATCTT 
ATCGATTACC ATCCAACGAC ATACAAATAT TTGAATGTCG ATGGTGAAAC ACATATCCAA 
GGTGTGGAGC TTGTTGCTGA GTTTGATACA GGGATTGTGC AGCACCAGTT GAGTGCGGAT 
TACAAAGATG CTGAAGACGA TAAAGGGCAT CAGTTGCAGC GCCGCGCTAA AGAAATGTAT 
AAGTGGAACG CTTTAGTGAG CTTCGATAAA GTGGACTGGT CGGTTAGCTA TCAGTACGTC 
GGTAAGCGTC CAGATGTGGA TTACAGCACT TGGCCTTCAC AAGATATTAC GCTTTCTTCT 
TACTCGTTGG TTGATACGGC GGTGACTTAC TATCCGAATG AGTCGACCTC TATTAGCGCT 
CGTATCGATA ATCTATTTGA TGAAGAGTAT GAGATGGCAA AAGGTTACCC TGCTGCAGAG 
CGAGCGTACT ATCTCAACGT TGGCTACGAA TTCTAA 

 

Protein sequence

MRKSALAITL ASLLSPVSYL QAQETSTDET IVVTANRFEQ AESRTLADVE VVTRQDIDRI 
QAKTLPDVLR RLTGIQVSQN GGRGQLASLF VRGTSSDQVL VLVDGVRFAR AAKGAVDFNQ 
IPLTYVQRIE YVRGARASLY GSEAIGGVIN IITIARADEE GTKLSAGLGS LDYQELSVAS 
GIKVTESGQL NIALGSESDD GYNVRPVPGV NDGDRHGFDT KNGLLGYVHN FNDQWSVFGN 
LRAYENVYQY DSSYGSRGYY EAEKDDLSAT LGGKYQSGNV MSELQVTAQK QKSWNYEQAK 
GKHSGTEDEL EQQNVQWTNS YLLNNNTTFA GGIDWRNESY KDKSANKTFD RTNGALFGMA 
TTSIDKAMLE GSARLDDNEE YGSEFTYSLA AGYQFVPEFG VKASFGTAFK APNLYQQYDP 
TYGEKDLKPE ESDAWELAFS GDVQGVFWSV TGYDYKITNL IDYHPTTYKY LNVDGETHIQ 
GVELVAEFDT GIVQHQLSAD YKDAEDDKGH QLQRRAKEMY KWNALVSFDK VDWSVSYQYV 
GKRPDVDYST WPSQDITLSS YSLVDTAVTY YPNESTSISA RIDNLFDEEY EMAKGYPAAE 
RAYYLNVGYE F