Gene VEA_002149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002149 
Symbol 
ID8555804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp566259 
End bp566882 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID646405168 
ProductSOS-response repressor and protease LexA 
Protein accessionYP_003284777 
Protein GI262392923 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGT TAACGCCACG CCAACAACAA GTCTTCGATT TGATCAAAAG TAAAATCGAT 
GATACCGGAA TGCCACCAAC TCGTGCAGAG ATTGCGCGTG AGCTTGGCTT CCGCTCTGCG
AATGCCGCAG AGGAACACCT AAAAGCGCTT GCTCGTAAGC AAGCAATTGA AATTATCCCA
GGTGCATCGC GTGGGATTCG TATCCTACTT GATGACTCTG CCGCTAATGA CGAACAGGGC
TTGCCTTTGA TTGGTCAAGT TGCTGCGGGT GAGCCCATAT TGGCTCAGGA ACACGTAGAA
GCGCATTACC AAGTCGATCC TGCGATGTTC AAACCGCAAG CGGATTTCTT ACTTCGTGTA
AATGGCGAAA GTATGAAAGA CATCGGGATT ATGGATGGTG ACTTGCTCGC GGTGCATAAG
ACCCAAGACG TGAGAGATGG TCAAGTTGTC GTTGCGCGTG TTGATGATGA TGTGACTGTG
AAGCGTTTGG AGCGCAAAGG TTCAACCATA TTACTGCATG CTGAGAATGA AGAGTTTGCC
CCAATTCAAG TGGACTTAAC GTCTCAGCAC CTTACGATTG AAGGCTTAGC CGTTGGTATT
ATTCGTAATA CCGATTGGAT GTAA
 
Protein sequence
MKPLTPRQQQ VFDLIKSKID DTGMPPTRAE IARELGFRSA NAAEEHLKAL ARKQAIEIIP 
GASRGIRILL DDSAANDEQG LPLIGQVAAG EPILAQEHVE AHYQVDPAMF KPQADFLLRV
NGESMKDIGI MDGDLLAVHK TQDVRDGQVV VARVDDDVTV KRLERKGSTI LLHAENEEFA
PIQVDLTSQH LTIEGLAVGI IRNTDWM