| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002141 |
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| Symbol | |
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| ID | 8555796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 558858 |
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| End bp | 559715 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405160 |
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| Product | RNA polymerase sigma factor RpoH |
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| Protein accession | YP_003284769 |
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| Protein GI | 262392915 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000181562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAG AAGCGTATCC GATGGCTCTA GTCACGCAAG ATAGCCTTGA TAGCTATATT
CGCTCAGTAA ACAGCTACCC AATGCTGACT GCAGACGAAG AGCGTGAGCT GGCAGAACGA
TTACACTACA AAGGTGAGAT TGAGGCTGCA AAAGGTCTAA TTCTTTCGCA CCTACGATTC
GTTGTTCACG TTGCTCGTGG TTACTCTGGC TACGGTTTGC CAATGGCGGA CCTTGTGCAA
GAGGGTAACA TCGGTCTAAT GAAAGCCGTT AAGCGTTTTA ACCCAGAAGT AGGGGTTCGC
TTGGTGTCTT TTGCTGTCCA CTGGATCAAA GCAGAGATCC ACGAATACGT GCTACGTAAC
TGGCGTATCG TGAAAATTGC GACCACTAAA GCGCAACGTA AGTTGTTCTT CAACTTGCGT
AAGTCGAAAA AGCGCTTGGG TTGGTTTAAC AACGGTGAAG TCGAAACCGT TGCGCGTGAG
TTAGGTGTTG AGCCTTCTGA AGTTCGCGAG ATGGAATCAC GCTTAGCGGC GGTGGATTCA
ACCTTTGATA TGCCAACTGA TGAAGACGAC AGCTCAAACG CTTACACAGC GCCGATGCTG
TACCTAGAAG ACAAATCGTC TGATGTGGCT GACAACATCG AAGCTGCAAA CTGGGAAATG
CACACCAACA ATCGCTTGGG TCATGCATTA GCGAGTTTAG ATGAACGTAG TCAGCGTATC
GTGCGTTCTC GTTGGTTAGA TGATGAGAAA GCAACATTGC AAGACTTAGC TGATGAGTTT
GGTGTGTCTG CCGAGCGTAT TCGTCAGCTA GAAAAAAACG CAATGAAGAA ACTAAAATTG
GCCGTGGGTG AATTTTAA
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| Protein sequence | MTKEAYPMAL VTQDSLDSYI RSVNSYPMLT ADEERELAER LHYKGEIEAA KGLILSHLRF
VVHVARGYSG YGLPMADLVQ EGNIGLMKAV KRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKIATTK AQRKLFFNLR KSKKRLGWFN NGEVETVARE LGVEPSEVRE MESRLAAVDS
TFDMPTDEDD SSNAYTAPML YLEDKSSDVA DNIEAANWEM HTNNRLGHAL ASLDERSQRI
VRSRWLDDEK ATLQDLADEF GVSAERIRQL EKNAMKKLKL AVGEF
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