| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002137 |
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| Symbol | |
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| ID | 8555792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 554972 |
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| End bp | 555571 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405156 |
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| Product | ribosomal RNA small subunit methyltransferase D |
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| Protein accession | YP_003284765 |
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| Protein GI | 262392911 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGAC GTCGCCAGCA AAACTCATCA CAAAAAAAGC CAACAACGGG CTTTGTTCGC
ATTATTAGTG GCTTATGGAG AGGCAGAAAA CTTCCTGTAC ACGATGCTGA AGGCTTACGC
CCAACGACCG ATCGCGTCAA AGAAACGCTA TTTAACTGGC TGGCTCAAGA TGTGCCGCAA
GCAAAATGTC TCGACTTATT TGCCGGCTCC GGCGGCTTAG GCTTTGAGTC AGCTTCGCGC
CAAGCAGAGC AAGTGACCAT GGTTGAGCTG AACCCACAAG CTTTTCAGCA ATTACAGAAG
AACGTGGCAT CTCTTAACGC GAACAACATC CAAGTAGTGA ATACAGATGC CTTGAGCTTT
TTAAAACAGC CGGGTACTGC GCATCATGTG GTGTTTATTG ACCCACCGTT TCGCAAAGGT
CTGTTGGATG AGACCGTGGC TCTGCTAGAA CAAAATGGCT GGCTCGCGGA AGATGCGATG
ATTTATATTG AAACAGAAAA AGAACTCAAT ATTGCCGACT TACCAGAAAA CTGGCAATTA
CATCGAGAAA AAACAGCAGG CCAAGTGAGC TATCGTCTGT ATGAACGTAC CTCCGCATAA
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| Protein sequence | MVRRRQQNSS QKKPTTGFVR IISGLWRGRK LPVHDAEGLR PTTDRVKETL FNWLAQDVPQ
AKCLDLFAGS GGLGFESASR QAEQVTMVEL NPQAFQQLQK NVASLNANNI QVVNTDALSF
LKQPGTAHHV VFIDPPFRKG LLDETVALLE QNGWLAEDAM IYIETEKELN IADLPENWQL
HREKTAGQVS YRLYERTSA
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